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SCNpilot_expt_1000_bf_scaffold_7148_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7148_curated_1
Neisseria macacae, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..372)
DNA (372bp) protein (124aa)
Type I restriction enzyme EcoEI specificity protein n=1 Tax=Neisseria macacae ATCC 33926 RepID=F9EWL4_9NEIS
Type I restriction enzyme EcoEI specificity protein {ECO:0000313|EMBL:EGQ76899.1}; TaxID=997348 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria macacae ATCC 33926.;"
type I restriction modification system HsdS component
SCNpilot_expt_1000_bf_scaffold_7148_curated_2
GWA2_OP3_50_21_curated, Omnitrophica, Bacteria

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comp(548..1123)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Clostridium beijerinckii RepID=UPI0002F1F0D1
transcriptional regulator
Tax=GWA2_OP3_50_21_curated
SCNpilot_expt_1000_bf_scaffold_7148_curated_3
GWF2_TM6_33_332, TM6, Bacteria

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comp(1098..2018)
DNA (921bp) protein (307aa)
Divergent AAA domain protein n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D151_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKP52434.1}; TaxID=1619080 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_33_332.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_7148_curated_4
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2018..4159)
DNA (2142bp) protein (714aa)
type II site-specific deoxyribonuclease (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I site-specific deoxyribonuclease n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0M0_PALPW
Tax=CG_Flavo_02
SCNpilot_expt_1000_bf_scaffold_7148_curated_5
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5252..6478)
DNA (1227bp) protein (409aa)
Tyrosine recombinase xerD n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GCF2_9BACT
site-specific recombinase XerD
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_expt_1000_bf_scaffold_7148_curated_6
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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6732..6959
DNA (228bp) protein (76aa)
Protein containing GIY-YIG catalytic domain n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BCK1_ZUNPS
hypothetical protein; K07461 putative endonuclease
Protein containing GIY-YIG catalytic domain {ECO:0000313|EMBL:ADF50514.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).;"
SCNpilot_expt_1000_bf_scaffold_7148_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7383..9029)
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C2AAB
TonB-denpendent receptor {ECO:0000313|EMBL:AHF15929.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor plug
Displaying 7 items

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