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SCNpilot_expt_1000_bf_scaffold_5922_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_5922_curated_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..1569)
DNA (1569bp) protein (523aa)
TonB-denpendent receptor n=1 Tax=Rudanella lutea RepID=UPI000365F19B
TonB-dependent receptor {ECO:0000313|EMBL:KIC95719.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_5922_curated_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1730..2635)
DNA (906bp) protein (302aa)
TonB-dependent receptor plug n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZN8_PEDHD
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU04734.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_expt_1000_bf_scaffold_5922_curated_3
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2811..3917)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HFB7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60461.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
FecR protein
SCNpilot_expt_1000_bf_scaffold_5922_curated_4

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comp(4079..5179)
DNA (1101bp) protein (367aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000363725B
Uncharacterized protein {ECO:0000313|EMBL:KKN18012.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_5922_curated_5
Sphingobacterium paucimobilis, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5233..5823)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HYW9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ERJ60460.1}; TaxID=1346330 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium paucimobilis HER1398.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_5922_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5900..7138)
DNA (1239bp) protein (413aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flav
glutamate-5-semialdehyde dehydrogenase; K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
Gamma-glutamyl phosphate reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCQ9_NIAKG
SCNpilot_expt_1000_bf_scaffold_5922_curated_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7204..8238)
DNA (1035bp) protein (345aa)
Glutamate 5-kinase {ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|SAAS:SAAS00186442};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glutamate 5-kinase; K00931 glutamate 5-kinase [EC:2.7.2.11]
glutamate 5-kinase n=1 Tax=Segetibacter koreensis RepID=UPI000372A782
SCNpilot_expt_1000_bf_scaffold_5922_curated_8
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8321..10588)
DNA (2268bp) protein (756aa)
sodium:proton antiporter n=1 Tax=Niabella aurantiaca RepID=UPI000360D062
Sodium:proton antiporter {ECO:0000313|EMBL:KIC96202.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
potassium/proton antiporter RosB; K03455 monovalent cation:H+ antiporter-2, CPA2 family
Displaying 8 items

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