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SCNpilot_expt_1000_bf_scaffold_2982_curated

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2982_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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149..1942
DNA (1794bp) protein (598aa)
AMP-dependent synthetase n=1 Tax=Niabella aurantiaca RepID=UPI00037DD9DD
AMP-dependent synthetase {ECO:0000313|EMBL:AHF16669.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
long-chain-fatty-acid--CoA ligase
SCNpilot_expt_1000_bf_scaffold_2982_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2087..5371)
DNA (3285bp) protein (1095aa)
OmpA-related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NRW7_9SPHI
Cell envelope biogenesis protein OmpA {ECO:0000313|EMBL:AHF16607.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
OmpA-like protein
SCNpilot_expt_1000_bf_scaffold_2982_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5664..6863
DNA (1200bp) protein (400aa)
GTP cyclohydrolase-2; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
Riboflavin biosynthesis protein RibBA n=1 Tax=Niabella soli DSM 19437 RepID=H1NRW6_9SPHI
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6983..8110)
DNA (1128bp) protein (376aa)
cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7]
Cysteine desulfurase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL1_9SPHI
Cysteine desulfurase {ECO:0000313|EMBL:AHF16800.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_5
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(8171..8686)
DNA (516bp) protein (172aa)
phosphoglucosamine mutase; K01840 phosphomannomutase [EC:5.4.2.8]
phosphoglucosamine mutase n=1 Tax=Niabella aurantiaca RepID=UPI0003767454
Putative phosphoglucosamine mutase {ECO:0000313|EMBL:GAO43563.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8688..9533)
DNA (846bp) protein (282aa)
phosphoglucosamine mutase; K01840 phosphomannomutase [EC:5.4.2.8]
phosphoglucosamine mutase n=1 Tax=Niabella aurantiaca RepID=UPI0003767454
Phosphoglucosamine mutase {ECO:0000313|EMBL:AHF16801.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_7
unknown

Not on your lists

comp(9677..10018)
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003763EE2
SCNpilot_expt_1000_bf_scaffold_2982_curated_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10015..11091)
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003763EE2
sulfatase
Sulfatase {ECO:0000313|EMBL:AEW00703.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11767..12384
DNA (618bp) protein (206aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL3_9SPHI
Phosphoesterase {ECO:0000313|EMBL:AHF16802.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
membrane-associated phospholipid phosphatase
SCNpilot_expt_1000_bf_scaffold_2982_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12384..13682
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16803.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2982_curated_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14134..14559
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003738120
Uncharacterized protein {ECO:0000313|EMBL:ETZ20218.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
periplasmic ATP/GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_2982_curated_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14667..15617)
DNA (951bp) protein (317aa)
Sulfate transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV5_NIAKG
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AEV99784.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_13
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15742..16227)
DNA (486bp) protein (162aa)
Sulfate transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKV5_NIAKG
sulfate transporter
Sulfate transporter {ECO:0000313|EMBL:AEV99784.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_2982_curated_14
unknown

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comp(16242..16358)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2982_curated_15
unknown

Not on your lists

comp(16474..16947)
DNA (474bp) protein (158aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2982_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17102..17935
DNA (834bp) protein (278aa)
Esterase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN3_9SPHI
Esterase {ECO:0000313|EMBL:AHF16817.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
esterase
SCNpilot_expt_1000_bf_scaffold_2982_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18078..20123
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN4_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16818.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K06888
SCNpilot_expt_1000_bf_scaffold_2982_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20164..20727
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTN5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16819.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2982_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20724..22532)
DNA (1809bp) protein (603aa)
UvrABC system protein C n=1 Tax=Niabella soli DSM 19437 RepID=H1NT49_9SPHI
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
Displaying 19 items

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