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SCNpilot_expt_1000_bf_scaffold_1540_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1540_curated_1
unknown

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comp(2..187)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1540_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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978..3416
DNA (2439bp) protein (813aa)
Soluble ligand binding domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI5_9SPHI
Capsule polysaccharide transporter {ECO:0000313|EMBL:AHF14222.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
polysaccharide export protein
SCNpilot_expt_1000_bf_scaffold_1540_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3421..4527
DNA (1107bp) protein (369aa)
Lipopolysaccharide biosynthesis protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI6_9SPHI
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:AHF14221.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lipopolysaccharide biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1540_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4514..5743
DNA (1230bp) protein (410aa)
nucleotide sugar dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-]
Nucleotide sugar dehydrogenase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJI7_9SPHI
Vi polysaccharide biosynthesis protein vipA/tviB {ECO:0000313|EMBL:AHF14220.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1540_curated_5
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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5879..6967
DNA (1089bp) protein (363aa)
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T9W0_9FLAO
Putative PLP-dependent enzyme possibly involved in cell wall biogenesis {ECO:0000313|EMBL:EJL74917.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
SCNpilot_expt_1000_bf_scaffold_1540_curated_6
Acinetobacter guillouiae, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6961..8046
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 64.2 PF30_9GAMM">RepID=N9PF30_9GAMM
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000313|EMBL:BAP39194.1}; TaxID=106649 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter guillouiae (Acinetobacter genomosp. 11).;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
SCNpilot_expt_1000_bf_scaffold_1540_curated_7
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8244..8744
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CMW9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJL74919.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
SCNpilot_expt_1000_bf_scaffold_1540_curated_8
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8897..9415
DNA (519bp) protein (173aa)
Acetyltransferase (Isoleucine patch superfamily) n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K416_9FLAO
Acetyltransferase (Isoleucine patch superfamily) {ECO:0000313|EMBL:EJL74920.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. CF314.;"
acetyltransferase, CysE/LacA/LpxA/NodL family
SCNpilot_expt_1000_bf_scaffold_1540_curated_9
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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9421..10920
DNA (1500bp) protein (500aa)
Membrane protein involved in the export of O-antigen and teichoic acid n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CN97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC21248.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
polysaccharide biosynthesis protein
SCNpilot_expt_1000_bf_scaffold_1540_curated_10
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11213..12397
DNA (1185bp) protein (395aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DD33_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP51009.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
Glycosyltransferases involved in cell wall biogenesis
SCNpilot_expt_1000_bf_scaffold_1540_curated_11
Polaribacter irgensii, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12412..13671
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4BYM6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EAR12269.1}; TaxID=313594 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter irgensii 23-P.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1540_curated_12
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13765..14694
DNA (930bp) protein (310aa)
Hyaluronoglucosaminidase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R2_9FLAO
Hyaluronoglucosaminidase {ECO:0000313|EMBL:EFK33067.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1540_curated_13
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14733..15905
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I9QIF7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY28978.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
group 1 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_1540_curated_14
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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15907..16530
DNA (624bp) protein (208aa)
group 1 glycosyl transferase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2E283
Acetyltransferase, CYSE/LACA/LPXA/NODL family {ECO:0000313|EMBL:CEG29109.1}; TaxID=1476857 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B-jedd.;"
acetyltransferase
SCNpilot_expt_1000_bf_scaffold_1540_curated_15
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16811..17962
DNA (1152bp) protein (384aa)
N-acetyl sugar amidotransferase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R3_9FLAO
LPS biosynthesis protein {ECO:0000313|EMBL:KEY18826.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
LPS biosynthesis protein WbpG
SCNpilot_expt_1000_bf_scaffold_1540_curated_16
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17959..18573
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
hisH2; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0N9Q0_ELIME
SCNpilot_expt_1000_bf_scaffold_1540_curated_17
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18577..19341
DNA (765bp) protein (255aa)
imidazole glycerol phosphate synthase subunit HisF; K02500 cyclase [EC:4.1.3.-]
Putative imidazoleglycerol phosphate synthase, cyclase subunit n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R5_9FLAO
Putative imidazoleglycerol phosphate synthase, cyclase subunit {ECO:0000313|EMBL:EFK33070.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
SCNpilot_expt_1000_bf_scaffold_1540_curated_18
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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19345..20388
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000373B0EA
fnlA; UDP-L-FucpNAc biosynthesis protein FnlA
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_expt_1000_bf_scaffold_1540_curated_19
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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20633..21049
DNA (417bp) protein (139aa)
WxcM-like protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R7_9FLAO
Sugar epimerase {ECO:0000313|EMBL:KEY18830.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
sugar epimerase
SCNpilot_expt_1000_bf_scaffold_1540_curated_20
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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21361..22479
DNA (1119bp) protein (373aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4R8_9FLAO
Epimerase {ECO:0000313|EMBL:KFF18036.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
fnlB; UDP-L-FucpNAc biosynthesis protein FnlB
Displaying 20 items

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