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SCNpilot_expt_1000_bf_scaffold_1671_curated

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1671_curated_1
Fusarium oxysporum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

3..347
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C0AA0
Uncharacterized protein {ECO:0000313|EMBL:EXK43424.1}; TaxID=1089452 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium; Fusarium oxysporum species complex.;" source="Fusarium oxysporum f. sp. melonis 26406.;"
SCNpilot_expt_1000_bf_scaffold_1671_curated_2
unknown

Not on your lists

538..834
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1671_curated_3
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

918..2117
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000365BEC8
protein-disulfide isomerase
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
SCNpilot_expt_1000_bf_scaffold_1671_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2138..2863)
DNA (726bp) protein (242aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
2-phosphosulfolactate phosphatase; K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
2-phosphosulfolactate phosphatase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTF9_9SPHI
SCNpilot_expt_1000_bf_scaffold_1671_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2935..4017)
DNA (1083bp) protein (361aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aminomethyltransferase; K00605 aminomethyltransferase [EC:2.1.2.10]
glycine cleavage system protein T n=1 Tax=Niabella aurantiaca RepID=UPI0003631BA1
SCNpilot_expt_1000_bf_scaffold_1671_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4106..5350
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTG1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16120.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5440..6105
DNA (666bp) protein (222aa)
fatty acid hydroxylase n=1 Tax=Niabella aurantiaca RepID=UPI00036945BB
Fatty acid hydroxylase {ECO:0000313|EMBL:AHF16121.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
fatty acid hydroxylase
SCNpilot_expt_1000_bf_scaffold_1671_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6553..7338)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQF2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16404.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_9
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7338..7955)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MY04_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB60989.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7985..9256)
DNA (1272bp) protein (424aa)
cystathionine gamma-lyase; K01760 cystathionine beta-lyase [EC:4.4.1.8]
cystathionine beta-lyase n=1 Tax=Niabella aurantiaca RepID=UPI00037B9B43
Cystathionine beta-lyase {ECO:0000313|EMBL:AHF16403.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1671_curated_11
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9260..9640)
DNA (381bp) protein (127aa)
Two-component response regulator n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X146_FLAB3
Response regulator receiver protein {ECO:0000313|EMBL:KEY19181.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Two-component response regulator; K11443 two-component system, cell cycle response regulator DivK
SCNpilot_expt_1000_bf_scaffold_1671_curated_12
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9643..10206)
DNA (564bp) protein (188aa)
chemotaxis protein CheB (EC:3.1.1.61); K03412 two-component system, chemotaxis family, response regulator CheB [EC:3.1.1.61]
CheB methylesterase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X145_FLAB3
Chemotaxis protein CheB {ECO:0000313|EMBL:KEY19182.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_expt_1000_bf_scaffold_1671_curated_13
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10209..11027)
DNA (819bp) protein (273aa)
Protein-glutamate O-methyltransferase (EC:2.1.1.80); K00575 chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
Protein-glutamate O-methyltransferase {ECO:0000313|EMBL:ACU08157.1}; EC=2.1.1.80 {ECO:0000313|EMBL:ACU08157.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Protein-glutamate O-methyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X144_FLAB3
SCNpilot_expt_1000_bf_scaffold_1671_curated_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11029..11406)
DNA (378bp) protein (126aa)
Response regulator receiver protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X143_FLAB3
Histidine kinase {ECO:0000313|EMBL:KEY19184.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
response regulator receiver protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_15
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11417..11800)
DNA (384bp) protein (128aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Signal transduction histidine kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X142_FLAB3
Signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_1671_curated_16
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11850..12353)
DNA (504bp) protein (168aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
Signal transduction histidine kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X142_FLAB3
Signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_1671_curated_17
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15027..16151)
DNA (1125bp) protein (375aa)
Two-component hybrid sensor and regulator n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X141_FLAB3
Histidine kinase {ECO:0000313|EMBL:KEY19186.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
two-component hybrid sensor and regulator
SCNpilot_expt_1000_bf_scaffold_1671_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16717..17160
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQE8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16402.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_19
Flavobacterium enshiense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17257..18777)
DNA (1521bp) protein (507aa)
Beta-lactamase n=1 Tax=Flavobacterium enshiense DK69 RepID=V6SAI2_9FLAO
Beta-lactamase {ECO:0000313|EMBL:KGO97064.1}; TaxID=1107311 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium enshiense DK69.;"
beta-lactamase
SCNpilot_expt_1000_bf_scaffold_1671_curated_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19092..19655)
DNA (564bp) protein (188aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NL23_9SPHI
Cupin {ECO:0000313|EMBL:AHF14341.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cupin
SCNpilot_expt_1000_bf_scaffold_1671_curated_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20230..21339
DNA (1110bp) protein (370aa)
magnesium transporter n=1 Tax=Niabella aurantiaca RepID=UPI00036E85E1
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
magnesium and cobalt transport protein CorA; K03284 magnesium transporter
SCNpilot_expt_1000_bf_scaffold_1671_curated_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21341..21841)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUR9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16266.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1671_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21955..24093)
DNA (2139bp) protein (713aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036DB564
SCNpilot_expt_1000_bf_scaffold_1671_curated_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24301..24876
DNA (576bp) protein (192aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" s
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3]
Adenylate kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NS75_9SPHI
SCNpilot_expt_1000_bf_scaffold_1671_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24878..25327)
DNA (450bp) protein (150aa)
Viral A-type inclusion protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NS74_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17810.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1671_curated_26
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25345..25992)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035E4E35
Uncharacterized protein {ECO:0000313|EMBL:AHF17906.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
lysine exporter protein LysE/YggA
SCNpilot_expt_1000_bf_scaffold_1671_curated_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26032..26760)
DNA (729bp) protein (243aa)
GH3 auxin-responsive promoter n=1 Tax=Niabella aurantiaca RepID=UPI00036C2B29
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AHF16287.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GH3 auxin-responsive promoter
SCNpilot_expt_1000_bf_scaffold_1671_curated_28
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27691..29157
DNA (1467bp) protein (489aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Niabella soli DSM 19437 RepID=H1NSK9_9SPHI
SCNpilot_expt_1000_bf_scaffold_1671_curated_29
unknown

Not on your lists

29157..29432
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364B82E
SCNpilot_expt_1000_bf_scaffold_1671_curated_30
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29446..30369
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000364B82E
Thiol-disulfide isomerase {ECO:0000313|EMBL:AHF16063.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
alkyl hydroperoxide reductase
Displaying items 1-30 of 32 in total

View Taxonomy