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SCNpilot_expt_1000_bf_scaffold_2425_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2425_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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106..1992
DNA (1887bp) protein (629aa)
DNA mismatch repair protein MutL n=1 Tax=Niabella aurantiaca RepID=UPI000373E2EF
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
DNA mismatch repair protein MutL; K03572 DNA mismatch repair protein MutL
SCNpilot_expt_1000_bf_scaffold_2425_curated_2
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2072..3454)
DNA (1383bp) protein (461aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase id=2700681 bin=GWF2_Bacteroidetes_42_66 species=Pedobacter heparinus genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_2425_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3535..4581)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F6739
Epimerase {ECO:0000313|EMBL:AHF16100.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_2425_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4568..4768)
DNA (201bp) protein (67aa)
Transcriptional regulator, XRE family n=1 Tax=Niabella soli DSM 19437 RepID=H1NT17_9SPHI
XRE family transcriptional regulator {ECO:0000313|EMBL:AHF16099.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
XRE family transcriptional regulator; K07727 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2425_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4780..5301)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NT16_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17837.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2425_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5402..6595)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E69F2
Beta-lactamase regulatory protein {ECO:0000313|EMBL:AHF16426.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
family 2 glycosyl transferase
SCNpilot_expt_1000_bf_scaffold_2425_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6756..8531
DNA (1776bp) protein (592aa)
acyl-CoA dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00037A88B2
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AHF16428.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
butyryl-CoA dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2425_curated_8
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(8590..9204)
DNA (615bp) protein (205aa)
Methyltransferase type 11 n=2 Tax=Microcystis aeruginosa RepID=B0JJ62_MICAN
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:CCH94077.1}; TaxID=1160280 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9432.;"
SCNpilot_expt_1000_bf_scaffold_2425_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9270..9656)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQN1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16438.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2425_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9798..10244
DNA (447bp) protein (149aa)
xenobiotic ABC transporter ATP-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F6AC2
Xenobiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15970.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_2425_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10387..11145
DNA (759bp) protein (253aa)
xenobiotic ABC transporter ATP-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00036F6AC2
Xenobiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHF15970.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter
Displaying 11 items

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