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SCNpilot_expt_1000_bf_scaffold_3972_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3972_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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550..1593
DNA (1044bp) protein (348aa)
chromate transporter n=1 Tax=Niabella aurantiaca RepID=UPI00037CA341
Chromate transporter {ECO:0000313|EMBL:AHF16174.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
chromate ion transporter family chromate transporter; K07240 chromate transporter
SCNpilot_expt_1000_bf_scaffold_3972_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1594..2166)
DNA (573bp) protein (191aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
nicotinate-nucleotide adenylyltransferase; K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTY5_9SPHI
SCNpilot_expt_1000_bf_scaffold_3972_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2178..2420)
DNA (243bp) protein (81aa)
iron transporter n=1 Tax=Niabella aurantiaca RepID=UPI000374BEA1
Iron transporter {ECO:0000313|EMBL:AHF16172.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
feoA; ferrous iron transport protein A; K04758 ferrous iron transport protein A
SCNpilot_expt_1000_bf_scaffold_3972_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2478..2942
DNA (465bp) protein (155aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Endoribonuclease YbeY n=1 Tax=Niabella soli DSM 19437 RepID=H1NTY3_9SPHI
metalloprotease ybeY
SCNpilot_expt_1000_bf_scaffold_3972_curated_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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2976..3590
DNA (615bp) protein (205aa)
Nuclease n=1 Tax=Moumouvirus goulette RepID=M1PN01_9VIRU
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_3972_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3625..4719
DNA (1095bp) protein (365aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Niabella soli DSM 19437 RepID=H1NTY2_9SPHI
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
SCNpilot_expt_1000_bf_scaffold_3972_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4784..5500
DNA (717bp) protein (239aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Niabella aurantiaca RepID=UPI00037372AA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme
SCNpilot_expt_1000_bf_scaffold_3972_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5618..6373
DNA (756bp) protein (252aa)
3-oxoacyl-(acyl-carrier-protein) reductase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTY7_9SPHI
3-oxoacyl-ACP synthase {ECO:0000313|EMBL:AHF16175.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_3972_curated_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6459..8621)
DNA (2163bp) protein (721aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379BBF5
Peptidase S46
Peptidase S46 {ECO:0000313|EMBL:AEW02421.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_3972_curated_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8815..10734
DNA (1920bp) protein (640aa)
glycoside hydrolase family protein n=1 Tax=Pedobacter agri RepID=UPI00029A74D2
Glycosyl hydrolase, family 18 {ECO:0000313|EMBL:EFK58418.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
glycoside hydrolase
SCNpilot_expt_1000_bf_scaffold_3972_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10880..11344
DNA (465bp) protein (155aa)
Nuclear protein SET n=1 Tax=Niabella soli DSM 19437 RepID=H1NQ94_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17927.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
nuclear protein SET; K07117
SCNpilot_expt_1000_bf_scaffold_3972_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11375..11833
DNA (459bp) protein (153aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {ECO:0000256|HAMAP-Rule:MF_02128};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
thiamine-phosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16]
Thiamine-monophosphate kinase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUZ3_9SPHI
Displaying 12 items

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