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SCNpilot_expt_1000_bf_scaffold_4440_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4440_curated_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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63..257
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TPG5_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97786.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_4440_curated_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(258..1895)
DNA (1638bp) protein (546aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2]
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Adenine deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQJ7_NIAKG
SCNpilot_expt_1000_bf_scaffold_4440_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2006..2680)
DNA (675bp) protein (225aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
tRNA (Guanine37-N(1)-) methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NV45_9SPHI
SCNpilot_expt_1000_bf_scaffold_4440_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2713..3111)
DNA (399bp) protein (133aa)
RNA-binding protein S4 n=1 Tax=Niabella aurantiaca RepID=UPI00037FC9BF
RNA-binding protein S4 {ECO:0000313|EMBL:AHF15814.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
heat shock protein Hsp15; K04762 ribosome-associated heat shock protein Hsp15
SCNpilot_expt_1000_bf_scaffold_4440_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3117..3551)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUN9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15750.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4440_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3808..4197
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00038032C1
Hydrolase {ECO:0000313|EMBL:AHF15751.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NLP/P60 protein
SCNpilot_expt_1000_bf_scaffold_4440_curated_7
unknown

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comp(4267..4503)
DNA (237bp) protein (79aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4440_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4803..5459)
DNA (657bp) protein (219aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
phosphatidylserine decarboxylase n=1 Tax=Niabella aurantiaca RepID=UPI000362F1A3
SCNpilot_expt_1000_bf_scaffold_4440_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5571..6413)
DNA (843bp) protein (281aa)
outer membrane transport energization protein TonB n=1 Tax=Niabella aurantiaca RepID=UPI00036E1C44
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:AHF15619.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane transport energization protein TonB; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_4440_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6980..7555)
DNA (576bp) protein (192aa)
Aminopeptidase N-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUP8_9SPHI
Peptidase M1 {ECO:0000313|EMBL:AHF15759.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
aminopeptidase precursor
SCNpilot_expt_1000_bf_scaffold_4440_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9080..10192)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NR22_9SPHI
Membrane protein {ECO:0000313|EMBL:AHF16511.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4440_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10207..10899)
DNA (693bp) protein (231aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ribose 5-phosphate isomerase; K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6]
Ribose-5-phosphate isomerase A n=1 Tax=Niabella soli DSM 19437 RepID=H1NUM8_9SPHI
SCNpilot_expt_1000_bf_scaffold_4440_curated_13
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10907..12094)
DNA (1188bp) protein (396aa)
Acetylornithine transaminase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUM7_9SPHI
Aminotransferase class III {ECO:0000313|EMBL:AHF15741.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Acetylornithine transaminase
SCNpilot_expt_1000_bf_scaffold_4440_curated_14
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12235..14328)
DNA (2094bp) protein (698aa)
Phosphoribosylformylglycinamidine synthase n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1M9Y9_9FLAO
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:EKB59173.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain-containing protein
Displaying 14 items

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