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SCNpilot_expt_1000_bf_scaffold_1377_curated

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1377_curated_1

Not on your lists

47..910
DNA (864bp) protein (288aa)
Mobilization protein BmgA n=1 Tax=Formosa agariphila KMM 3901 RepID=T2KMG0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KKO00940.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Relaxase/mobilization nuclease family protein
SCNpilot_expt_1000_bf_scaffold_1377_curated_2
Tamlana nanhaiensis, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1118..3118
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI000299F289
Uncharacterized protein {ECO:0000313|EMBL:KJD32601.1}; TaxID=1382798 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana nanhaiensis.;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_3
unknown

Not on your lists

3257..3589
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_4
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3589..5016
DNA (1428bp) protein (476aa)
IPT/TIG domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZWV9_9BACT
IPT/TIG domain protein {ECO:0000313|EMBL:EAY25136.1}; TaxID=313606 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
protein containing ipt/tig domains (cell surface receptor)
SCNpilot_expt_1000_bf_scaffold_1377_curated_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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5031..7253
DNA (2223bp) protein (741aa)
Signal transduction histidine kinase id=3651330 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
integral membrane sensor signal transduction histidine kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1377_curated_6
unknown

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comp(7365..7868)
DNA (504bp) protein (168aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_7
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7940..8782)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZD5_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48430.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_8
Prevotella sp. CAG:474, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8976..10622
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI0003693F17
Cysteine protease putative {ECO:0000313|EMBL:CDD00869.1}; TaxID=1262926 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:474.;"
cysteine protease
SCNpilot_expt_1000_bf_scaffold_1377_curated_9
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

13025..14356
DNA (1332bp) protein (444aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036DEDC8
Uncharacterized protein {ECO:0000313|EMBL:KIF34698.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
WD repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_1377_curated_10
unknown

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14445..15521
DNA (1077bp) protein (359aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_11
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

16141..17715
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Lewinella persica RepID=UPI00036DEDC8
Uncharacterized protein {ECO:0000313|EMBL:KIF34698.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
WD repeat-containing protein
SCNpilot_expt_1000_bf_scaffold_1377_curated_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17780..18247)
DNA (468bp) protein (156aa)
Regulatory protein, LuxR:Response regulator receiver n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5T9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA90384.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
LuxR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1377_curated_13
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18440..20215)
DNA (1776bp) protein (592aa)
Signal transduction histidine kinase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5T8_FLAB3
Signal transduction histidine kinase
Signal transduction histidine kinase {ECO:0000313|EMBL:ACU07776.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_14
unknown

Not on your lists

20382..20909
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_15
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21879..23237
DNA (1359bp) protein (453aa)
Integrase n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U6K9_CROAH
integrase
Integrase {ECO:0000313|EMBL:EAP87876.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_16
unknown

Not on your lists

23239..24183
DNA (945bp) protein (315aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_17
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24259..24585
DNA (327bp) protein (109aa)
Excisionase family DNA binding domain-containing protein n=2 Tax=Bacteroides dorei RepID=I8VPH4_9BACE
DNA-binding protein {ECO:0000313|EMBL:KGN79374.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadaceae bacterium COT-184 OH4590.;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_18
Croceibacter atlanticus, Croceibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24602..24925
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U6L3_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAP87880.1}; TaxID=216432 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Croceibacter.;" source="Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090).;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_19
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24922..26346
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI0003780D79
Uncharacterized protein {ECO:0000313|EMBL:EHB93527.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
phage/plasmid primase, P4 family; K06919 putative DNA primase/helicase
SCNpilot_expt_1000_bf_scaffold_1377_curated_20
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26475..27404
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003679CFE
Uncharacterized protein {ECO:0000313|EMBL:KIC89996.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_expt_1000_bf_scaffold_1377_curated_21
unknown

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27409..27606
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_22
unknown

Not on your lists

27687..27881
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_23
unknown

Not on your lists

27891..28220
DNA (330bp) protein (110aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_24
unknown

Not on your lists

28225..28821
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_25
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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28830..29126
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y7B7_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ29004.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1377_curated_26
unknown

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29110..29388
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_27
unknown

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29411..29617
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_28
unknown

Not on your lists

29601..29981
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_29
unknown

Not on your lists

29920..30180
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1377_curated_30
unknown

Not on your lists

30180..30578
DNA (399bp) protein (133aa)

This feature has no annotations

Displaying items 1-30 of 37 in total

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