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SCNpilot_expt_1000_bf_scaffold_2499_curated

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2499_curated_1
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..849
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A330_MELRP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFN75618.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
SCNpilot_expt_1000_bf_scaffold_2499_curated_2
unknown

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892..1068
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2499_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(979..1425)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQE8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16402.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2499_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1712..2554)
DNA (843bp) protein (281aa)
outer membrane transport energization protein TonB n=1 Tax=Niabella aurantiaca RepID=UPI00036E1C44
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:AHF15619.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB family protein; K03832 periplasmic protein TonB
SCNpilot_expt_1000_bf_scaffold_2499_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2615..3244)
DNA (630bp) protein (210aa)
outer membrane transport energization protein ExbD n=1 Tax=Niabella aurantiaca RepID=UPI00037451A1
Outer membrane transport energization protein ExbD {ECO:0000313|EMBL:AHF15620.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane transport energization protein ExbD
SCNpilot_expt_1000_bf_scaffold_2499_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3276..3965)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F1648
Biopolymer transportern ExbD {ECO:0000313|EMBL:AHF15621.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane transport energization protein ExbD
SCNpilot_expt_1000_bf_scaffold_2499_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4039..4896)
DNA (858bp) protein (286aa)
Outer membrane transport energization protein ExbB n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE1_9SPHI
Flagellar motor protein MotA {ECO:0000313|EMBL:AHF15622.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane transport energization protein ExbB; K03561 biopolymer transport protein ExbB
SCNpilot_expt_1000_bf_scaffold_2499_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5152..6432)
DNA (1281bp) protein (427aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035CB997
Uncharacterized protein {ECO:0000313|EMBL:AHF15623.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein; K02004 putative ABC transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2499_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6549..7928)
DNA (1380bp) protein (460aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NADH dehydrogenase subunit N; K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit N n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE3_9SPHI
SCNpilot_expt_1000_bf_scaffold_2499_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7952..9421)
DNA (1470bp) protein (490aa)
NADH dehydrogenase subunit M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
NADH dehydrogenase subunit M n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE4_9SPHI
NADH dehydrogenase subunit M {ECO:0000313|EMBL:AHF15625.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2499_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9555..9914)
DNA (360bp) protein (120aa)
NADH dehydrogenase subunit L; K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3]
NADH dehydrogenase subunit L n=1 Tax=Niabella aurantiaca RepID=UPI00036B51A6
NADH dehydrogenase subunit L {ECO:0000313|EMBL:AHF15626.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2499_curated_12
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11425..11781)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DPJ9_9FIRM
hypothetical protein
Tax=CG_Falkow_03
SCNpilot_expt_1000_bf_scaffold_2499_curated_13
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11771..12040)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1MDC4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB60313.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CCUG 30536.;"
putative nucleotidyltransferase
SCNpilot_expt_1000_bf_scaffold_2499_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12080..12409)
DNA (330bp) protein (110aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NADH dehydrogenase subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit K n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE6_9SPHI
SCNpilot_expt_1000_bf_scaffold_2499_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12548..12940)
DNA (393bp) protein (131aa)
NADH dehydrogenase subunit J; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH dehydrogenase subunit J n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE7_9SPHI
NADH dehydrogenase subunit J {ECO:0000313|EMBL:AHF15628.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2499_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12992..13549)
DNA (558bp) protein (186aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NADH dehydrogenase subunit I; K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit I n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE8_9SPHI
SCNpilot_expt_1000_bf_scaffold_2499_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13771..14715)
DNA (945bp) protein (315aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
NADH dehydrogenase subunit H; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit H n=1 Tax=Niabella soli DSM 19437 RepID=H1NTE9_9SPHI
SCNpilot_expt_1000_bf_scaffold_2499_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14791..15948)
DNA (1158bp) protein (386aa)
NADH dehydrogenase subunit G; K00336 NADH-quinone oxidoreductase subunit G [EC:1.6.5.3]
NADH dehydrogenase subunit G n=1 Tax=Niabella soli DSM 19437 RepID=H1NTF0_9SPHI
NADH dehydrogenase subunit G {ECO:0000313|EMBL:AHF15631.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2499_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15987..16736)
DNA (750bp) protein (250aa)
NADH dehydrogenase subunit F; K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3]
NADH dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI000376EAAE
NADH dehydrogenase {ECO:0000313|EMBL:AHF15632.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Displaying 19 items

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