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SCNpilot_expt_1000_bf_scaffold_1971_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1971_curated_1
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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1..531
DNA (531bp) protein (177aa)
Tax=GWA2_Bacteroidetes_31_9b_curated
SCNpilot_expt_1000_bf_scaffold_1971_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(896..1792)
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTL9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF18067.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2032..3156
DNA (1125bp) protein (375aa)
peptidase M42 n=1 Tax=Niabella aurantiaca RepID=UPI00036BE42E
Peptidase M42 {ECO:0000313|EMBL:AHF15493.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
cellulase
SCNpilot_expt_1000_bf_scaffold_1971_curated_4
unknown

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3300..3533
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1971_curated_5
unknown

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comp(3530..3898)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1971_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3965..4342)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17829.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4372..4638)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSN3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17829.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5321..6058)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000373688B
Haloacid dehalogenase {ECO:0000313|EMBL:AHF16079.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily
SCNpilot_expt_1000_bf_scaffold_1971_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6097..6795
DNA (699bp) protein (233aa)
short-chain dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00037E575D
Short-chain dehydrogenase {ECO:0000313|EMBL:AHF16329.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_1971_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6829..8217
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NV89_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17915.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8271..9524)
DNA (1254bp) protein (418aa)
twin-arginine translocation pathway signal n=1 Tax=Niabella aurantiaca RepID=UPI00036B586D
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AHF16410.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9584..11038)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003821247
Uncharacterized protein {ECO:0000313|EMBL:AHF16409.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_13
unknown

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comp(11216..11530)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003731CFE
SCNpilot_expt_1000_bf_scaffold_1971_curated_14
unknown

Not on your lists

comp(11623..11925)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003731CFE
SCNpilot_expt_1000_bf_scaffold_1971_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11928..13289)
DNA (1362bp) protein (454aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11]
seryl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI000370EAF8
Seryl-tRNA synthetase {ECO:0000313|EMBL:AHF15893.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1971_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13406..14593
DNA (1188bp) protein (396aa)
GTPase HflX n=1 Tax=Niabella aurantiaca RepID=UPI0003820372
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP-binding protein HflX; K03665 GTP-binding protein HflX
SCNpilot_expt_1000_bf_scaffold_1971_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14841..15485
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003664D35
ABC transporter {ECO:0000313|EMBL:AHF16513.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ABC transporter
SCNpilot_expt_1000_bf_scaffold_1971_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15565..16728
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036C177E
Uncharacterized protein {ECO:0000313|EMBL:AHF16512.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1971_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16777..17517)
DNA (741bp) protein (247aa)
Nucleotidyltransferase family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUU4_9SPHI
Nucleotidyltransferase {ECO:0000313|EMBL:AHF15764.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
nucleotidyltransferase
SCNpilot_expt_1000_bf_scaffold_1971_curated_20
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17566..18084)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUU5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15765.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying 20 items

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