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SCNpilot_expt_1000_bf_scaffold_2657_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2657_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2..421)
DNA (420bp) protein (140aa)
Saccharopine dehydrogenase (NADP(+), L-lysine-forming) n=1 Tax=Niabella soli DSM 19437 RepID=H1NPP9_9SPHI
Saccharopine dehydrogenase {ECO:0000313|EMBL:AHF14951.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
saccharopine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2657_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(504..1118)
DNA (615bp) protein (205aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
superoxide dismutase n=1 Tax=Niabella aurantiaca RepID=UPI000371C41D
Cu/Zn superoxide dismutase
SCNpilot_expt_1000_bf_scaffold_2657_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1300..2253
DNA (954bp) protein (318aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
thioredoxin reductase n=1 Tax=Niabella aurantiaca RepID=UPI000365EFF4
Thioredoxin reductase {ECO:0000313|EMBL:AHF14789.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2657_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2293..2664
DNA (372bp) protein (124aa)
dihydroneopterin aldolase; K01633 dihydroneopterin aldolase [EC:4.1.2.25]
Dihydroneopterin aldolase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLQ7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17310.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2657_curated_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2799..3590
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036CBDBE
Uncharacterized protein {ECO:0000313|EMBL:ETZ19710.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
NlpD fragment
SCNpilot_expt_1000_bf_scaffold_2657_curated_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3661..4620
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035C9A0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81004.1}; Flags: Precursor;; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_1000_bf_scaffold_2657_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4732..5535
DNA (804bp) protein (268aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003714C87
RNA methyltransferase {ECO:0000313|EMBL:AHF14382.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_2657_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5587..6582
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00036BA4A9
Uncharacterized protein {ECO:0000313|EMBL:AHF14384.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GSCFA domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2657_curated_9
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6592..7362
DNA (771bp) protein (257aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Segetibacter koreensis RepID=UPI0003821AB1
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC91743.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
phosphonate-transporting ATPase; K09812 cell division transport system ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_2657_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7343..8440)
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000373C432
Uncharacterized protein {ECO:0000313|EMBL:AHF17320.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative mannosyltransferase
SCNpilot_expt_1000_bf_scaffold_2657_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8617..9612)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037EFB61
Uncharacterized protein {ECO:0000313|EMBL:AHF17319.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
TonB-dependent receptor
Displaying 11 items

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