ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4549_curated

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4549_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..682
DNA (681bp) protein (227aa)
GTPase Era n=1 Tax=Niabella soli DSM 19437 RepID=H1NL57_9SPHI
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP-binding protein Era-like-protein; K03595 GTP-binding protein Era
SCNpilot_expt_1000_bf_scaffold_4549_curated_2
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

778..2094
DNA (1317bp) protein (439aa)
GTPase Der n=1 Tax=Niabella soli DSM 19437 RepID=H1NKU3_9SPHI
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GTP-binding protein engA; K03977 GTP-binding protein
SCNpilot_expt_1000_bf_scaffold_4549_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2173..2550
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKU2_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17164.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_4549_curated_4
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

3241..5130
DNA (1890bp) protein (630aa)
NADH/Ubiquinone/plastoquinone (Complex I) n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T5B6_THEA1
NADH/Ubiquinone/plastoquinone (complex I); K14086 ech hydrogenase subunit A
NADH/Ubiquinone/plastoquinone (Complex I) {ECO:0000313|EMBL:ADU96454.1}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
SCNpilot_expt_1000_bf_scaffold_4549_curated_5
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

5163..6008
DNA (846bp) protein (282aa)
Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1) RepID=E8T5B5_THEA1
respiratory-chain NADH dehydrogenase subunit 1
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:ADU96453.1}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" source="Thermovibrio ammonificans (strain DSM 15698 / JCM 12110 / HB-1).;"
SCNpilot_expt_1000_bf_scaffold_4549_curated_6
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

6063..6602
DNA (540bp) protein (180aa)
Ni/Fe hydrogenase, type 3 or 4, small subunit {ECO:0000313|EMBL:EHP30897.1}; EC=1.-.-.- {ECO:0000313|EMBL:EHP30897.1};; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfurimonas.;" source="Sulfurimonas gotlandica (strain DSM 19862 / JCM 16533 / GD1).;"
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Hydrogenase-4 component I n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BMI8_9HELI
SCNpilot_expt_1000_bf_scaffold_4549_curated_7
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

6735..7082
DNA (348bp) protein (116aa)
Putative F420H2:quinone oxidoreductase, 39.7 kDa subunit n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3G5_DESTD
F420H2:quinone oxidoreductase, 39.7 kDa subunit
Putative F420H2:quinone oxidoreductase, 39.7 kDa subunit {ECO:0000313|EMBL:ADY73387.1}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
SCNpilot_expt_1000_bf_scaffold_4549_curated_8
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

7093..8181
DNA (1089bp) protein (363aa)
Donor-ubiquinone reductase I, putative n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BP18_9HELI
NADH dehydrogenase {ECO:0000313|EMBL:KFN38715.1}; TaxID=1537917 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source="Sulfuricurvum sp. MLSB.;"
ech hydrogenase subunit e
SCNpilot_expt_1000_bf_scaffold_4549_curated_9
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

8225..8716
DNA (492bp) protein (164aa)
NADH-ubiquinone oxidoreductase 23 kDa subunit n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S3G3_DESTD
NADH-ubiquinone oxidoreductase 23 kda subunit
NADH-ubiquinone oxidoreductase 23 kDa subunit {ECO:0000313|EMBL:ADY73385.1}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
SCNpilot_expt_1000_bf_scaffold_4549_curated_10
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8816..9463
DNA (648bp) protein (216aa)
TonB-dependent receptor id=4610621 bin=GWF2_Bacteroidetes_33_38 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
tonb-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=GWF2_Bacteroidetes_33_38_curated
Displaying 10 items

View Taxonomy