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SCNpilot_expt_1000_bf_scaffold_6590_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6590_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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101..679
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003711696
Membrane protein {ECO:0000313|EMBL:AHF15694.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_6590_curated_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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680..1108
DNA (429bp) protein (143aa)
DNA-(Apurinic or apyrimidinic site) lyase ;Pyrimidine dimer DNA glycosylase id=4263540 bin=GWF2_Bacteroidetes_33_38 species=Ignisphaera aggregans genus=Ignisphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DNA-(apurinic or apyrimidinic site) lyase / pyrimidine dimer DNA glycosylase
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
SCNpilot_expt_1000_bf_scaffold_6590_curated_3
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1147..1815)
DNA (669bp) protein (223aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; K00991 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NJG6_9SPHI
SCNpilot_expt_1000_bf_scaffold_6590_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1921..3210
DNA (1290bp) protein (430aa)
bifunctional folylpolyglutamate synthase/dihydrofolate synthase; K11754 dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035D665F
Tetrahydrofolate synthase {ECO:0000313|EMBL:AHF14646.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_6590_curated_5
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3318..4658)
DNA (1341bp) protein (447aa)
Acetyl-CoA carboxylase subunit alpha {ECO:0000313|EMBL:AHF16791.1}; EC=6.4.1.1 {ECO:0000313|EMBL:AHF16791.1};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
acetyl-CoA carboxylase, biotin carboxylase; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Niabella soli DSM 19437 RepID=H1NTA7_9SPHI
SCNpilot_expt_1000_bf_scaffold_6590_curated_6
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4766..5251)
DNA (486bp) protein (162aa)
acetyl-CoA carboxylase n=1 Tax=Niabella aurantiaca RepID=UPI00037B39B4
Acetyl-CoA carboxylase {ECO:0000313|EMBL:AHF16792.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein; K02160 acetyl-CoA carboxylase biotin carboxyl carrier protein
SCNpilot_expt_1000_bf_scaffold_6590_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5441..6010)
DNA (570bp) protein (190aa)
elongation factor P n=1 Tax=Niabella aurantiaca RepID=UPI000366FCC3
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
translation elongation factor P (EF-P); K02356 elongation factor P
SCNpilot_expt_1000_bf_scaffold_6590_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6684..7055
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NTB0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF16794.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
Displaying 8 items

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