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SCNpilot_expt_1000_bf_scaffold_1214_curated

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1214_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NUU5_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF15765.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1214_curated_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

891..1412
DNA (522bp) protein (174aa)
acetyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000363865D
isoleucine patch superfamily carbonic anhydrase/acetyltransferase
Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein {ECO:0000313|EMBL:ACU57924.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_3
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1523..2704)
DNA (1182bp) protein (394aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8); K01787 N-acylglucosamine 2-epimerase [EC:5.1.3.8]
N-acylglucosamine 2-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y403_PEDHD
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:KIA85703.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. AED.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_4
Anabaena sp. 90, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(2787..3290)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Anabaena sp. 90 RepID=K7WMX3_9NOST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFW96923.1}; TaxID=46234 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena sp. 90.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3332..4501)
DNA (1170bp) protein (390aa)
Exo-alpha-sialidase; K01186 sialidase-1 [EC:3.2.1.18]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003687A88
Exo-alpha-sialidase {ECO:0000313|EMBL:KIC94500.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_6
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4538..5806)
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037F1D17
Putative uncharacterized protein {ECO:0000313|EMBL:EEC53377.1}; TaxID=483216 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii DSM 20697.;"
major facilitator family transporter rbh
SCNpilot_expt_1000_bf_scaffold_1214_curated_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(5972..7051)
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037D5CED
SSS sodium solute transporter superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1214_curated_8
unknown

Not on your lists

7188..7373
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1214_curated_9
unknown

Not on your lists

7360..7611
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1214_curated_10
unknown

Not on your lists

7608..7727
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_1214_curated_11
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7732..8673)
DNA (942bp) protein (314aa)
dihydrodipicolinate synthetase; K01639 N-acetylneuraminate lyase [EC:4.1.3.3]
N-acetylneuraminate lyase n=1 Tax=Niabella soli DSM 19437 RepID=H1NKR7_9SPHI
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AHF14601.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_12
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10953..12512)
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361B1DE
RagB/SusD domain-containing protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_expt_1000_bf_scaffold_1214_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12532..15906)
DNA (3375bp) protein (1125aa)
TonB-dependent receptor plug n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W5M2_DYAFD
TonB-dependent receptor {ECO:0000313|EMBL:KIC91869.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_1214_curated_14
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15933..16727
DNA (795bp) protein (265aa)
GntR domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKR4_9SPHI
GntR family transcriptional regulator {ECO:0000313|EMBL:AHF14604.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
GntR family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_1214_curated_15
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16959..18545)
DNA (1587bp) protein (529aa)
peptide chain release factor 3 n=1 Tax=Niabella aurantiaca RepID=UPI00037A8AAF
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
peptide chain release factor 3 (bRF-3); K02837 peptide chain release factor 3
SCNpilot_expt_1000_bf_scaffold_1214_curated_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18808..19068
DNA (261bp) protein (87aa)
Acyl-coA-binding protein ACBP n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THR9_NIAKG
Acyl-CoA-binding protein {ECO:0000313|EMBL:KIF33498.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
acyl-coA-binding protein ACBP
SCNpilot_expt_1000_bf_scaffold_1214_curated_17
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19073..19573)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003708A6F
Metal-dependent hydrolase {ECO:0000313|EMBL:AHF15315.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1214_curated_18
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(19579..20091)
DNA (513bp) protein (171aa)
Thioesterase superfamily protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKY4_9SPHI
thioesterase superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_expt_1000_bf_scaffold_1214_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20175..21254)
DNA (1080bp) protein (360aa)
hypothetical protein; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000374AB8D
Uncharacterized protein {ECO:0000313|EMBL:AEW03230.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_20
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21356..22006
DNA (651bp) protein (217aa)
uracil phosphoribosyltransferase; K00761 uracil phosphoribosyltransferase [EC:2.4.2.9]
uracil phosphoribosyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000372CAFF
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:KIC95378.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_21
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22118..22861
DNA (744bp) protein (248aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSH1_9SPHI
S-adenosylmethionine-dependent methyltransferase {ECO:0000313|EMBL:AHF15554.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_22
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22882..23334)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003782622
Uncharacterized protein {ECO:0000313|EMBL:AHF15555.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1214_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23648..24349
DNA (702bp) protein (234aa)
acetyltransferase n=1 Tax=Niabella aurantiaca RepID=UPI000367F324
Acetyltransferase {ECO:0000313|EMBL:AHF15556.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_1214_curated_24
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24364..25572
DNA (1209bp) protein (403aa)
argininosuccinate synthase; K01940 argininosuccinate synthase [EC:6.3.4.5]
argininosuccinate synthase n=1 Tax=Niabella aurantiaca RepID=UPI00035F382A
Argininosuccinate synthase {ECO:0000313|EMBL:AHF15557.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_1214_curated_25
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25756..26745
DNA (990bp) protein (330aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase; K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NSH7_9SPHI
SCNpilot_expt_1000_bf_scaffold_1214_curated_26
unknown

Not on your lists

comp(26791..27000)
DNA (210bp) protein (70aa)

This feature has no annotations

Displaying 26 items

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