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SCNpilot_expt_1000_bf_scaffold_4091_curated

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_4091_curated_1
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..481
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI0003673D37
Uncharacterized protein {ECO:0000313|EMBL:AHF17012.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4091_curated_2
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

581..1078
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000379375D
hypothetical protein
Tax=CG_Bacteroid_02
SCNpilot_expt_1000_bf_scaffold_4091_curated_3
unknown

Not on your lists

comp(1048..1149)
DNA (102bp) protein (34aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4091_curated_4
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1205..2131)
DNA (927bp) protein (309aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Epoxyqueuosine reductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NK65_9SPHI
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4091_curated_5
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


2487..2735
DNA (249bp) protein (83aa)
50S ribosomal protein L31 n=1 Tax=Niabella aurantiaca RepID=UPI00035E30CE
50S ribosomal protein L31 type B {ECO:0000256|HAMAP-Rule:MF_00502, ECO:0000256|SAAS:SAAS00004504}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
50S ribosomal protein L31; K02909 large subunit ribosomal protein L31
SCNpilot_expt_1000_bf_scaffold_4091_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2809..3609
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M093_GRAFK
Uncharacterized protein {ECO:0000313|EMBL:KIC93869.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4091_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3684..3935
DNA (252bp) protein (84aa)
Sugar-1-phosphate guanyl transferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLB8_9SPHI
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:AHF14854.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_4091_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3947..4708
DNA (762bp) protein (254aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
triosephosphate isomerase n=1 Tax=Niabella aurantiaca RepID=UPI00037362AD
SCNpilot_expt_1000_bf_scaffold_4091_curated_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4781..5944
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000362C921
group 1 glycosyl transferase
Tax=GWE2_Bacteroidetes_32_14_curated
SCNpilot_expt_1000_bf_scaffold_4091_curated_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5984..6853)
DNA (870bp) protein (290aa)
sugar phosphate isomerase n=1 Tax=Niabella aurantiaca RepID=UPI00037FA7BE
Sugar phosphate isomerase {ECO:0000313|EMBL:AHF14801.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase domain-containing protein
SCNpilot_expt_1000_bf_scaffold_4091_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6885..7769)
DNA (885bp) protein (295aa)
xylose isomerase domain-containing protein; K01816 hydroxypyruvate isomerase [EC:5.3.1.22]
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000371E7A6
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AEW02480.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_4091_curated_12
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7838..8632)
DNA (795bp) protein (265aa)
hypothetical protein AnHS1_02619 id=2117854 bin=GWD2_Bacteroidales_45_23 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidales_45_23 organism_group=Bacteroidetes
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_4091_curated_13
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8660..9991)
DNA (1332bp) protein (444aa)
oxidoreductase n=1 Tax=Alistipes sp. AP11 RepID=UPI000315A83C
Predicted dehydrogenases and related proteins
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_4091_curated_14
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10324..10707)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037E321E
nucleoside:proton symporter
Nucleoside:proton symporter {ECO:0000313|EMBL:AEM70563.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
SCNpilot_expt_1000_bf_scaffold_4091_curated_15
unknown

Not on your lists

11718..11807
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_4091_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11832..12524
DNA (693bp) protein (231aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Niabella soli DSM 19437 RepID=H1NLL8_9SPHI
AP endonuclease {ECO:0000313|EMBL:AHF14798.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
xylose isomerase
Displaying 16 items

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