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SCNpilot_expt_1000_bf_scaffold_3503_curated_8

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(9571..10086)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NUZ1_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 169.0
  • Bit_score: 189
  • Evalue 3.30e-45
Uncharacterized protein {ECO:0000313|EMBL:AHF17901.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.4
  • Coverage: 169.0
  • Bit_score: 189
  • Evalue 4.60e-45
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 168.0
  • Bit_score: 113
  • Evalue 7.30e-23

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 516
ATGACCGGATTTGATGAACATTTTTTAAAGAAGGTTTTCTACAAACATTATGACAGGGTCTTTAACAATTTTCTGCAAAAAACAAGTTCGTTTGACGTAGCAAAAGACCTTGCTCAGGTTACTTTTATCAAATTCTGGGAATACAGAGACACCTATAATCCCGAACTATCCGATGAAATACAATTAAACAGAAAAGCAAAACTTGTGTTTATTGACTGGCTGCGAAAAGAAGCGCACCAGCGTAAATTGATAAAAGAAATCGAAAAATTTGATGCTGTTGAAGTGAGGCCTGGAAAGTTCGAATTGACAGATTCACTTAAAAAAGCCATCGACCAATTACCAGCCGTGCGAAAGAAAGTCTTTTTACTCTCTTATATAGATGGTTACTCCCACAAAGAAATTGCCGAACAACTCAACATAAGCACCCGCACCGTGGAATCGCATATTTTTAAGGCGGTTCAACAATTACGGAAAATTCTGGCATTTTTCGTAATTGCCTCCCTTATTGTTGATTAA
PROTEIN sequence
Length: 172
MTGFDEHFLKKVFYKHYDRVFNNFLQKTSSFDVAKDLAQVTFIKFWEYRDTYNPELSDEIQLNRKAKLVFIDWLRKEAHQRKLIKEIEKFDAVEVRPGKFELTDSLKKAIDQLPAVRKKVFLLSYIDGYSHKEIAEQLNISTRTVESHIFKAVQQLRKILAFFVIASLIVD*