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SCNpilot_expt_1000_bf_scaffold_3503_curated

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_3503_curated_1
unknown

Not on your lists

comp(15..134)
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3503_curated_2
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(190..1842)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B3029
Uncharacterized protein {ECO:0000313|EMBL:KJD37221.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3503_curated_3
Tamlana sedimentorum, Tamlana, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1870..3525)
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029B3029
Uncharacterized protein {ECO:0000313|EMBL:KJD37221.1}; TaxID=1435349 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Tamlana.;" source="Tamlana sedimentorum.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3503_curated_4
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3660..5312)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363D2EE
SusD family protein {ECO:0000313|EMBL:EEZ03412.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
SusD family.
SCNpilot_expt_1000_bf_scaffold_3503_curated_5
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5337..7454)
DNA (2118bp) protein (706aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7M644_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN02577.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
TonB-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_3503_curated_6
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7403..8374)
DNA (972bp) protein (324aa)
TonB-dependent receptor plug domain protein n=1 Tax=Bacteroides xylanisolvens SD CC 2a RepID=D4WZL0_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EGX26084.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
tonb-dependent receptor plug
SCNpilot_expt_1000_bf_scaffold_3503_curated_7
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8424..9479)
DNA (1056bp) protein (352aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niabella soli DSM 19437 RepID=H1NUZ0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17900.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anti-FecI sigma factor FecR
SCNpilot_expt_1000_bf_scaffold_3503_curated_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9571..10086)
DNA (516bp) protein (172aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niabella soli DSM 19437 RepID=H1NUZ1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17901.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_expt_1000_bf_scaffold_3503_curated_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10424..11002
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381AA99
Membrane protein {ECO:0000313|EMBL:AHF15253.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
outer membrane protein
SCNpilot_expt_1000_bf_scaffold_3503_curated_10
CG_Flavo_02, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11061..11393)
DNA (333bp) protein (111aa)
Tax=CG_Flavo_02
SCNpilot_expt_1000_bf_scaffold_3503_curated_11
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11874..12602
DNA (729bp) protein (243aa)
Secreted glycosyl hydrolase id=1970371 bin=GWE2_Bacteroidetes_42_39 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_3503_curated_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12710..14278
DNA (1569bp) protein (523aa)
Putative aminopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KRK5_SOLCM
putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:AFD07586.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_3503_curated_13
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14305..14793)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037732D3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD06314.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_expt_1000_bf_scaffold_3503_curated_14
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14846..15898)
DNA (1053bp) protein (351aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI000381ED55
hypothetical protein
Tax=GWB2_Bacteroidetes_41_8_curated
SCNpilot_expt_1000_bf_scaffold_3503_curated_15
unknown

Not on your lists

comp(15962..16144)
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_3503_curated_16
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16443..17012
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037930BD
Uncharacterized protein {ECO:0000313|EMBL:AHF17161.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3503_curated_17
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17342..17893
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000372BB1E
Uncharacterized protein {ECO:0000313|EMBL:KFF73692.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_3503_curated_18
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17903..18151
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NPH1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:AHF17423.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCNpilot_expt_1000_bf_scaffold_3503_curated_19
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18375..19457
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPH2_9SPHI
SCNpilot_expt_1000_bf_scaffold_3503_curated_20
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19640..20803
DNA (1164bp) protein (388aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding-protein; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
Phosphoglycerate dehydrogenase id=3591595 bin=GWC2_Bacteroidetes_46_850 species=Desulfitobacterium metallireducens genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
Tax=GWC2_Bacteroidetes_46_850_curated
SCNpilot_expt_1000_bf_scaffold_3503_curated_21
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20873..21442
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381736C
cAMP-binding protein {ECO:0000313|EMBL:KGO10678.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
Crp/Fnr family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_3503_curated_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21519..22433
DNA (915bp) protein (305aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Niabella soli DSM 19437 RepID=H1NPH3_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO44708.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
NAD-dependent epimerase/dehydratase
SCNpilot_expt_1000_bf_scaffold_3503_curated_23
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22540..23946)
DNA (1407bp) protein (469aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
glucose-6-phosphate isomerase; K01810 glucose-6-phosphate isomerase [EC:5.3.1.9]
Glucose-6-phosphate isomerase n=1 Tax=Niabella soli DSM 19437 RepID=H1NLS4_9SPHI
Displaying 23 items

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