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SCNpilot_expt_1000_bf_scaffold_2600_curated_9

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: 5480..5968

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein GntR HTH n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY01_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 150.0
  • Bit_score: 189
  • Evalue 2.40e-45
GntR family transcriptional regulator {ECO:0000313|EMBL:KIC93023.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 152.0
  • Bit_score: 190
  • Evalue 2.60e-45
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 150.0
  • Bit_score: 189
  • Evalue 7.60e-46

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Taxonomy

Flavihumibacter solisilvae → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGGTTATATCCAGCCCAAATGTTGTGGGAACATTCGAAAAGGTGCTTAACCCCGTAATTATGGATGCTGCTACATTGCAGGATCTTTTTGAACTTCGGCTTGTGTTAGAAGTAGGTATTGCTGATCTTTTATTTATTCGAAAAAATGCGGCTGCTATTAATGAGCTCGAAACAATTGCTGCCAATGAAAGCAAAGGAGAGTTTTTTCGCATTAGCAACGAAATAGATTTTCACGGAAAGCTTTATGAAATGACCGGAAATAATACACTAAAGAATTTTCAAAAATTATTATTACCGGTTTTTGGTTATGTTACAAAACTTGAAAAAGAAAAGCAGGTATCTGGTAAGGTAACACATAGACACCTGGTACAATTACTTCGAAATGGCAATAAAGAAGATTTTCGTATGGGTATGCTGGCCCATCTTAAACCGCATTACGACCGGCTGGTACAAAAGAAAGACCAGCCTATACTCCCTGAAGAAAAATAA
PROTEIN sequence
Length: 163
MVISSPNVVGTFEKVLNPVIMDAATLQDLFELRLVLEVGIADLLFIRKNAAAINELETIAANESKGEFFRISNEIDFHGKLYEMTGNNTLKNFQKLLLPVFGYVTKLEKEKQVSGKVTHRHLVQLLRNGNKEDFRMGMLAHLKPHYDRLVQKKDQPILPEEK*