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SCNpilot_expt_1000_bf_scaffold_2289_curated_4

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: 3217..7020

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 999.99
  • Bit_score: 2374
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 999.99
  • Bit_score: 2247
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Niabella aurantiaca RepID=UPI000372F327 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 999.99
  • Bit_score: 2378
  • Evalue 0.0

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3804
ATGTCTTCCACAAGCGTAAAGTCAAGAGTAAACTTCGGGAAAATCAAGCATTTAGCTGAAACACCTGACCTGCTCGAAGTTCAGATTCAATCTTTTAAAGAATTTTTTCAATTAGAAACCACCCCAGACAAAAGAAACATTGAGGGTCTTTTTCGTGTGTTTAAGGACAACTTCCCTATCACCGATACCCGCAATATTTTCGTGCTGGAGTTTTTAGATTATTTTATTGACCCGCCCCGTTATTCGATTGAAGAGTGTATGGAGCGTGGCCTCACTTATGCAGTTCCGCTGAAAGCGAAACTGCGTTTGAGCTGTAACGACGAAGAGCACGTTGATTTCCAAACCATCGTTCAGGATGTATTCTTAGGAAACATTCCTTACATGACCCCGCGCGGCACTTTCGTGATTAATGGCGCGGAGCGTGTTGTGGTTTCTCAGCTTCACCGTTCGCCCGGCGTATTCTTCGGTCAGTCCGTTCACCCGAACGGAACAAAAATTTACTCGGCCCGCGTAATTCCTTTCAAAGGTGCGTGGATGGAGTTTGCCACCGATATCAACAACGTAATGTATGCTTATATTGATCGTAAGAAGAAATTCCCTGTAACGACTCTCTTACGCTCAATCGGCTACGAAACCGATAAAGATATCCTCGAACTTTTCGGCATGGCAGATGAAGTGCCCGGAGATAGAAAAAAATTAGAGGTTCACTTAGGTAAAAGATTAGCAGCGAGGGTATTGCGCACATGGGTGGAAGATTTTGTTGATGAAGATACCGGTGAGGTTGTTTCTATTGAGCGCAACGAGATTGTGATGGAACGCGACACAATTTTGGATGAGGAAGCTATTGAAACCATCGTTGATATGGATGTGAAGAGCGTATTCATTCAGCGTGACGATGTGGGCGGCGACTACGCTATTATATATAATACCTTAAATAAAGATACTTCTAACAGCGAGCTGGAAGCCGTTCAGTTCATCTATCGCCAATTACGTGGCGCTGATGCTCCTGATAACGAAACAGCACGTGGTATTATTGATAAATTATTCTTCAGCGATAAACGTTACGACCTTGGTGAAGTTGGCCGTTATAAAATTAACCGCAAGCTAAACCGCGAAGCGGAGATTACTCAGAAAACGCTCACCAAAGATGATATCATCGAGATCATCAAATATCTCGTTCGTTTAACCAACGGCAAAGCTGAGATTGACGATATCGATCACCTGAGCAACCGCCGCGTAAGAACTGTGGGCGAGCAATTATATGCGCAGTTTGGCGTAGGCCTGGCCCGTATGGCGCGTACCATTCGCGAAAGAATGAACGTTCGCGATAACGAGGTATTCACGCCGGTTGATTTGATTAATGCGAGAACACTTTCTTCAGTTATCAACTCATTTTTTGGGACTTCGCAGTTATCTCAATTCCTCGACCAAACCAATCCGCTTTCAGAAATTACGCACAAACGCCGTATTTCGGCGCTCGGGCCAGGCGGTTTAAGCCGTGAGCGGGCGGGCTTTGAGGTTCGTGACGTACACTACTCACACTACGGAAGGCTTTGTACCATCGAAACTCCAGAAGGCCCAAATATCGGTCTGATCTCTACCCTCTGCGTTCACGCAAAGATCAATGAGATGGGCTTTATTGAAACGCCTTACCGCAAAGTTGAGAACGGAAAAGTGAACATGAAAAAACTGGAATTGCTAAGCGCTGAAGAAGAAGATGAGGCAAAGATTGCGCAGGCAAACGCCCCGTTGAATGATGACGGCACTTTTGTGAATGACAGAGTTGCCAGCCGCGAAACCGGTGATTTCCCGATTTTAGAAAAAGAAGAAGTTCAGTATATGGACGTAGCGCCTAACCAGATTGTAGGTTTGAGTGCTTCGTTAATTCCCTTCCTTGAGCACGATGATGCCAACCGTGCATTGATGGGATCGAACATGCAACGCCAGGCGGTACCGCTCCTGCGCCCTGACGCTCCTATTGTGGGCACCGGCCTTGAAGGTAAAGCTGCGCGCGATGCAAGGATTCAGATTCACTCAGAAGGAAACGGTGTTGTTGAATTTGTGGATGCAAATGAAATTCACGTTCGCTATGACCGTGATGTAAACGATAAGCTGGTAAGTTTTGAAGAAGACCTGAAGGTTTACAATCTTACGAAATTCATTAAGACTAATCAGGAAACCTGTATTAACCTTGTTCCCGCCGTAAAGAAAGGACAAAAAGTTAAAACAGGAGATTTCTTAACCGAAGGTTATGCCACCAAAAATGGCGAATTAGCCCTGGGTAAAAACCTAAAAGTGGCGTTCATGCCGTGGAAGGGTTACAACTTTGAGGATGCCATCGTGATTAGCGAAAGAGTGGTAAAAGAAGATATGTTTACTTCTATCCACATTTCTGAATATGAACTGGAAGTGCGTGATACAAAATTGGGTGAAGAAGAACTGACTTCTGACATTCCTAACGTATCGGAGGAAGCTACAAAAGACCTCGATGAAAACGGTATCATCCGCATTGGCGCCCAAATTAAGGAAGGCGATATTTTGATTGGTAAGATTACTCCAAAAGGAGAAAGCGATCCTACTCCTGAGGAAAAATTATTGCGTGCGATCTTCGGTGATAAAGCCGGTGATGCAAAAGACGCATCACTAAAAGCACCGAACGGTGTAGAAGGTGTGGTAATCGGCAAAAAATTATTCCAGCGCGCTAAAAAAGATAAGAACGCAAAAGTTCGTGAAAAAGCAGCAATTGAAAAGCTGGATAAAATTCACGAAAAGAACGAACAGGATTTATTGGCAGTATTGATTGAAAAATTAGAAACTTTATTAGAAAACCAACCTTCGGCAGGTGTTAAAAACAGCTTTGAGGAAATGGTGATTGGCAAAGGTTCCAAGTTCAACAACAAAAACCTTTCGTCTTTAGATTTTGCAAATATTGATCCGCTTGGCTGGACGAATGATGAAAAGATCAACGGCCAGGTAAATACTTTATTACACAACTACAATATTAAATTTAACGAAGAGTTAGGCCGCTACAAACGTGAGAAATTCAACATCAGCATTGGTGATGAATTACCAGCCGGCGTGCTGAAACTGGCTAAAGTATATTTGGCAGTTAAACGTAAATTGAAAGTAGGTGATAAAATGGCGGGCCGCCACGGTAACAAAGGTATCGTAGCCAAAATCGGTCGCCATGAAGATATGCCGTTCCTTGAAGATGGCACACCGGTGGATATTGTATTGAACCCGCCTGGTGTACCAAGCCGTATGAACCTGGGGCAGATTTACGAAACTGTTTTAGGCTGGGCCGGTAAAGAGCTGGGCATCCGCTTCGCCACTCCTATTTTTGATGGCGCAGAACCTTCTGAAATAGAGGAATATTGCGATGAGGCAGGCATTCCGAAATACGGGCATACTTACCTGTACGACGGTGAAACAGGAGAGCGCTTTCACCAGAAAGCAACGGTAGGCGTAATCTACATGATCAAACTGCACCACATGGTTGATGATAAGATGCACGCACGTTCAATTGGGCCATACAGTTTAATTACTCAGCAGCCGCTGGGTGGTAAAGCACAGTTTGGTGGCCAGCGTTTTGGTGAAATGGAGGTTTGGGCACTGGAAGCCTACGGAGCATCTAACATTTTGCAGGAATTGTTAACTATTAAATCTGATGATATCATTGGCCGTGCAAAAACTTATGAGAGCATCGTAAAAGGTGATAACATTCCAAGGGCAGGCGTTCCCGAATCATTCAATGTACTGGTGCATGAATTAAGAGGATTAGGTTTAGACCTGACTTTTGAATAG
PROTEIN sequence
Length: 1268
MSSTSVKSRVNFGKIKHLAETPDLLEVQIQSFKEFFQLETTPDKRNIEGLFRVFKDNFPITDTRNIFVLEFLDYFIDPPRYSIEECMERGLTYAVPLKAKLRLSCNDEEHVDFQTIVQDVFLGNIPYMTPRGTFVINGAERVVVSQLHRSPGVFFGQSVHPNGTKIYSARVIPFKGAWMEFATDINNVMYAYIDRKKKFPVTTLLRSIGYETDKDILELFGMADEVPGDRKKLEVHLGKRLAARVLRTWVEDFVDEDTGEVVSIERNEIVMERDTILDEEAIETIVDMDVKSVFIQRDDVGGDYAIIYNTLNKDTSNSELEAVQFIYRQLRGADAPDNETARGIIDKLFFSDKRYDLGEVGRYKINRKLNREAEITQKTLTKDDIIEIIKYLVRLTNGKAEIDDIDHLSNRRVRTVGEQLYAQFGVGLARMARTIRERMNVRDNEVFTPVDLINARTLSSVINSFFGTSQLSQFLDQTNPLSEITHKRRISALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCVHAKINEMGFIETPYRKVENGKVNMKKLELLSAEEEDEAKIAQANAPLNDDGTFVNDRVASRETGDFPILEKEEVQYMDVAPNQIVGLSASLIPFLEHDDANRALMGSNMQRQAVPLLRPDAPIVGTGLEGKAARDARIQIHSEGNGVVEFVDANEIHVRYDRDVNDKLVSFEEDLKVYNLTKFIKTNQETCINLVPAVKKGQKVKTGDFLTEGYATKNGELALGKNLKVAFMPWKGYNFEDAIVISERVVKEDMFTSIHISEYELEVRDTKLGEEELTSDIPNVSEEATKDLDENGIIRIGAQIKEGDILIGKITPKGESDPTPEEKLLRAIFGDKAGDAKDASLKAPNGVEGVVIGKKLFQRAKKDKNAKVREKAAIEKLDKIHEKNEQDLLAVLIEKLETLLENQPSAGVKNSFEEMVIGKGSKFNNKNLSSLDFANIDPLGWTNDEKINGQVNTLLHNYNIKFNEELGRYKREKFNISIGDELPAGVLKLAKVYLAVKRKLKVGDKMAGRHGNKGIVAKIGRHEDMPFLEDGTPVDIVLNPPGVPSRMNLGQIYETVLGWAGKELGIRFATPIFDGAEPSEIEEYCDEAGIPKYGHTYLYDGETGERFHQKATVGVIYMIKLHHMVDDKMHARSIGPYSLITQQPLGGKAQFGGQRFGEMEVWALEAYGASNILQELLTIKSDDIIGRAKTYESIVKGDNIPRAGVPESFNVLVHELRGLGLDLTFE*