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SCNpilot_expt_1000_bf_scaffold_2289_curated_5

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: 10008..11162

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 385.0
  • Bit_score: 715
  • Evalue 5.50e-203
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 385.0
  • Bit_score: 615
  • Evalue 1.30e-173
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Niabella aurantiaca RepID=UPI00037773A0 similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 385.0
  • Bit_score: 720
  • Evalue 7.10e-205

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1155
GTGGGTGGTGTTGCAGGTTCTGCTTCGGTTGAATCTACTTTAATCGCTAAGTTCGACGGAACCATCCAGTTTGATGGTGTACGTTCTGTTGTTACTACAAATGCTGAGGGCGATGATGTGAGAGTAGTAATCGGCCGTACCGGTGAGGTTCGTATCATTGATACAAAAAATGATCGTTTACTGATCACTAATAATATTCCTTACGGTTCTACCCTACTTGTAAAAGACGGGCAGAAAGTTAGCAAAGGCGAGGCGATCTGCTCTTGGGATCCGTATAACAACGTGATCGTGGCCGAAACAGATGGTACGCTGAAATTTGAAAACGTTATTGAGGGTATCACCTACCGCGAAGAAGCTGACGAACAAACCGGCCACCGCGAAAAAGTGGTGATCGAAACCAGGGATAAAACAAAAATCCCTTCAATACTTGTTGAAGGAAAAGATATCAAGTCATACAACTTACCAACCGGTTCGCACATTATTTTAGATGATGGCGACGATGTTAAAGCCGGTAAGGTACTTGTGAAGATCCCTCGTATTTTAGGAAAACTGAAAGATATCACAGGGGGTCTGCCTCGTGTAACTGAATTGTTCGAAGCGCGTAACCCAAGCAACCCTGCGGTTGTGAGTGAAATTGACGGTGTGGTAACAATGGGTGCGATTAAACGCGGTAACAGAGAGATCATTATTGAAGCGAAAGACGGTGTTACAAGAAAATACCTTGTTCCTTTAACAAGGCAAATCCTTGCACAGGATGGCGACTTTGTAAAAGCAGGCAGCCCGCTTTCTGACGGTCAAATTTCTCCTCAGGATATTCTTTCAATTCAGGGCCCGTTTGCCGTACAACAGTACGTTGTAAACGAAATTCAGGAGGTTTATCGTTTACAGGGCGTGCGTATTAATGATAAGCACATCGAGGTGATCGTTCGCCAGATGATGCGTAAAGTAAATATCGTTGATCCGGGCGATACACGCTTCCTCGAAGACGACCTGGTTGATAAATTTGAATTTGTAGATGAGAACGACTTCGTGTACGAGAAGAAAGTAGTTACCGATCCGGGTGATTCTTCAAAACTACGTGCAGGGCAAATCATCAGCCTGCGCGACCTGAGAGAAGAAAACAGTGTACTGCGCCGTTCCGACAAAAAAGCGGTT
PROTEIN sequence
Length: 385
VGGVAGSASVESTLIAKFDGTIQFDGVRSVVTTNAEGDDVRVVIGRTGEVRIIDTKNDRLLITNNIPYGSTLLVKDGQKVSKGEAICSWDPYNNVIVAETDGTLKFENVIEGITYREEADEQTGHREKVVIETRDKTKIPSILVEGKDIKSYNLPTGSHIILDDGDDVKAGKVLVKIPRILGKLKDITGGLPRVTELFEARNPSNPAVVSEIDGVVTMGAIKRGNREIIIEAKDGVTRKYLVPLTRQILAQDGDFVKAGSPLSDGQISPQDILSIQGPFAVQQYVVNEIQEVYRLQGVRINDKHIEVIVRQMMRKVNIVDPGDTRFLEDDLVDKFEFVDENDFVYEKKVVTDPGDSSKLRAGQIISLRDLREENSVLRRSDKKAV