ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1374_curated_17

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(20193..22199)

Top 3 Functional Annotations

Value Algorithm Source
Chondroitin AC lyase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XV46_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 678.0
  • Bit_score: 554
  • Evalue 2.00e-154
chondroitin AC lyase similarity KEGG
DB: KEGG
  • Identity: 41.9
  • Coverage: 678.0
  • Bit_score: 554
  • Evalue 6.30e-155
Chondroitin AC lyase {ECO:0000313|EMBL:ACU06054.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.9
  • Coverage: 678.0
  • Bit_score: 554
  • Evalue 2.80e-154

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2007
ATGATGAGACAAATTCATTTATTTTTTCTATTATTTTTTTTAGCGTTTTCGTTAAATACTCATGCTTTGAACGAAACAGATACTATCATAAACAGGCATAAACGTTACCTTTTGCAAACAAATACAGTTAGCCGTGAGGCTGCGGTAAAGATTATGGAACTTTTCGTTGAAAAAACCGGCAGGTGGTCCAATATTGACTATACCGATAGCACACCTGCCCATTGGCCCTCAAAGGACCATTTGGAAAATATAAAGGCGTTGGCTGTCTATTTTGCAATGCATCACGAAAGTAGTGACACGGAAAATTTTTTAAATACAATTATTCGTGCACTCGATGAATGGCATAAGTATAAGTTTAAAAACCCTAACTGGTGGCATAATGAGATAGGCGTACCGCAACTGATGAAAGATATTTTAGTTTTAATTCGAGAGAAAGTAAGCGGAGACCGGTTGAAAAACTACCTTGAAATTGTAAACCAGTTCAGGATCAGCGGAACCGGCGCTAATCTTATCTGGAGCTCAGATATCGCTTTGTTTTACGGATTGTTTACCGGTAATAAAGAACTTATTGAAAAAGCTGTAAAGAATATTGTTGGAGAAATACGCATCAGCGATAAAGAAGGTTTAAGGCCCGATTACAGTTTTCATCAGCACGGCGAACGATTGCAAATGTACCAATACGGTCGGGTCTTTTTGATAGACAACGTTCGGCTATCCTGGGAATTGTTAAACACGCAATGGGCATTTCCGAAAGAAAAAATTGACCTGCTTGCAGGAATGTTCCTTAATGGTTGGCAATGGATGGCTCGGGGTATTAATACCATTCCCGAAACGATGGATCGTTCTGCCACACGAGTAAATGCCCTGAAGGAGGCTGACATAAGAACACATTTCCCATTTTTCATTGAGATTGCGCCGCGATATAAAACCGAACTGCTGGCCGCGAAAGCAAATCAGGAAGGGGGCGCTTATACATTAAAAGGGTTTCGTGGATTTCCCTACTCTGATTTTGTCACGTTTCACAATTCACCATACAGTTTCTTTTTAAAAACAATCTCGACGCGAACGTTACCCACAGAGTCCATTAATTATGAAAATCTGAAAGGCAAACCGCTTAACAGCGGCGAAACCTATTTTATACAAGATGGTACTGAATATTTCAATCTGATGCCGGTATGGAACTGGGACCGATTACCGGGTATAACATCTTTTGATGGAGCTGAAAAAATTGATAGGAAGGACTTCAACGGGATTATAACTGATGGCGATATAGGAATGTTGGCCATGGATTACAGGATGATTGGTAAAAACTATGACACTTATATTAGTTGTAAAAAAGCCTGGTTTAAAATCAATGGGTACATGGTGTGTCTTATTGGCGATATGAAACTGAATAATATTGATTCAGCCTACACCGTTATTGATCAATGTCGGCTGAAACAATATGTTTTTTCGAACACCGGCGAAATACAAAAAGGATTTTACAGAAATTTAAATGAAAAATGGTTTTATCATAACGATTTTGCATATCGCCCGCTATATACCTCACAATTCCAATTGTATGCCGATACGGTAAGTGGGACCTGGTATGATACCAATCACTCTTTCTCAAATGATAAAGTGATGGATAGTGTTTTTATGCCTTCTATTGTTCATGCCAAAACTGATCAAAAGAGTGGGTATACGGTTTTCTTCACTCAGAAAAAAAGGAAGGTTAAAAAAATTACCAGGAATCAGCCTTTCGTTATACTGCAGAATGATAAGGATATTCAGTCAATTTCGATTGCAAAAAATATACTGCTAGCCGCTTTTTATAACAAAGGGCAGATAAATTTCAAAAAAGAAATGCTGGTTGTTGAAAAACCTTGTTTGGTGCTCATGAAAAATAATGCTATTTACGTTTCAGACCCTACGCATAAAGGAATTTCTTTAAACCTGCAGTTCAATAATAAAAACTATAATGTGAGCCTTCCCGTTGATGGCAGTACCGTAAAAATTAGCCTTTGA
PROTEIN sequence
Length: 669
MMRQIHLFFLLFFLAFSLNTHALNETDTIINRHKRYLLQTNTVSREAAVKIMELFVEKTGRWSNIDYTDSTPAHWPSKDHLENIKALAVYFAMHHESSDTENFLNTIIRALDEWHKYKFKNPNWWHNEIGVPQLMKDILVLIREKVSGDRLKNYLEIVNQFRISGTGANLIWSSDIALFYGLFTGNKELIEKAVKNIVGEIRISDKEGLRPDYSFHQHGERLQMYQYGRVFLIDNVRLSWELLNTQWAFPKEKIDLLAGMFLNGWQWMARGINTIPETMDRSATRVNALKEADIRTHFPFFIEIAPRYKTELLAAKANQEGGAYTLKGFRGFPYSDFVTFHNSPYSFFLKTISTRTLPTESINYENLKGKPLNSGETYFIQDGTEYFNLMPVWNWDRLPGITSFDGAEKIDRKDFNGIITDGDIGMLAMDYRMIGKNYDTYISCKKAWFKINGYMVCLIGDMKLNNIDSAYTVIDQCRLKQYVFSNTGEIQKGFYRNLNEKWFYHNDFAYRPLYTSQFQLYADTVSGTWYDTNHSFSNDKVMDSVFMPSIVHAKTDQKSGYTVFFTQKKRKVKKITRNQPFVILQNDKDIQSISIAKNILLAAFYNKGQINFKKEMLVVEKPCLVLMKNNAIYVSDPTHKGISLNLQFNNKNYNVSLPVDGSTVKISL*