ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4843_curated_2

Organism: scnpilot_dereplicated_Sphingobacteriales_5

near complete RP 46 / 55 MC: 2 BSCG 41 / 51 MC: 1 ASCG 9 / 38
Location: comp(908..1681)

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 257.0
  • Bit_score: 354
  • Evalue 1.60e-94
tryptophan synthase subunit alpha; K01695 tryptophan synthase alpha chain [EC:4.2.1.20] similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 254.0
  • Bit_score: 346
  • Evalue 5.90e-93
tryptophan synthase subunit alpha n=1 Tax=Niabella aurantiaca RepID=UPI00035FC85A similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 256.0
  • Bit_score: 374
  • Evalue 8.30e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGAGCCGTTTACAAAATCTTTTCCAAAGAAAACAAAATCATATTTTAAATATCTACAGCACGGCGGGTTATCCTAATTTGGACAGCACTTTGCCCGTGATGAAAGCTTTGCAGGAAAATGGCGTTGATATCATTGAACTTGGTATGCCATACAGCGACCCGCTCGCTGATGGAGAAACAGTTCAGCATAGCAGTTCGGTTGCACTTTCAAATGGTATGACCATTAGAAAGTTATTTGAGCAACTGCAGGATTTTCGCGCTAATATCTCTATTCCGGTGGTGGTGATGGGTTATTTGAACCCTTTGTTGCAATACGGGTTTGAAAATTTTTGTGCAGATTGCGCCAAGGCCGGTATTGACGGACTGATCATTCCCGATATCCCTGTACATGAATATGAAAAAAATTATAAAGCAATCGTTGATAAATACGGCCTAGATTTTATCTTTTTAGTCACCCCTGAAACTTCAGAGGAACGTGTTAGAAAGCTCGATGAATTAAGTTCAGGATTTTTGTACGCGGTATCATCATCTTCAACAACCGGAAACGAGAAAGATTTTTCGTTAGTGGAAAAATATCTACAAAGGCTTCAAACCTATAATCTAAAAAATCCGATACTTGTTGGCTTTGGCATTAAAGACAAAGAAACTTTTACCAAATCTTGTAAATATGCTAACGGCGCTATCATTGGATCGGCTTTTATTAAGGCGCTCGGTAATGGTTCGTCTGAAGAAGTCGCCGCTAAAGAATTTATTTCAGCAATTCTTGAAAACTGA
PROTEIN sequence
Length: 258
MSRLQNLFQRKQNHILNIYSTAGYPNLDSTLPVMKALQENGVDIIELGMPYSDPLADGETVQHSSSVALSNGMTIRKLFEQLQDFRANISIPVVVMGYLNPLLQYGFENFCADCAKAGIDGLIIPDIPVHEYEKNYKAIVDKYGLDFIFLVTPETSEERVRKLDELSSGFLYAVSSSSTTGNEKDFSLVEKYLQRLQTYNLKNPILVGFGIKDKETFTKSCKYANGAIIGSAFIKALGNGSSEEVAAKEFISAILEN*