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SCNpilot_expt_1000_bf_scaffold_2393_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2393_curated_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3..1514
DNA (1512bp) protein (504aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKL6_CHIPD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ACU62082.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_2393_curated_2
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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1520..1852
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D8L2_PAESJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT03192.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
SCNpilot_expt_1000_bf_scaffold_2393_curated_3
unknown

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1991..2323
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2393_curated_4
unknown

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2541..3149
DNA (609bp) protein (203aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2393_curated_5
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3890..4102
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KFF13010.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
SCNpilot_expt_1000_bf_scaffold_2393_curated_6
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4315..7650
DNA (3336bp) protein (1112aa)
Amylo-alpha-16-glucosidase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWZ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC96244.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
amylo-alpha-16-glucosidase
SCNpilot_expt_1000_bf_scaffold_2393_curated_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(7673..8338)
DNA (666bp) protein (222aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUZ0_SOLCM
Uncharacterized protein {ECO:0000313|EMBL:KIC95445.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_expt_1000_bf_scaffold_2393_curated_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8510..9205
DNA (696bp) protein (232aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase I n=1 Tax=Flexithrix dorotheae RepID=UPI0003633A8D
SCNpilot_expt_1000_bf_scaffold_2393_curated_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

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9237..9905
DNA (669bp) protein (223aa)
Ferredoxin reductase id=4706633 bin=GWA2_Bacteroidetes_42_15 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
flavodoxin reductase family protein
Tax=GWE2_Bacteroidetes_42_39_curated
SCNpilot_expt_1000_bf_scaffold_2393_curated_10
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

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9982..10389
DNA (408bp) protein (136aa)
Fumarylacetoacetate hydrolase family protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6G3_CALAS
fumarylacetoacetate hydrolase family protein
Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:BAM00851.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
SCNpilot_expt_1000_bf_scaffold_2393_curated_11
unknown

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comp(10369..10470)
DNA (102bp) protein (34aa)

This feature has no annotations

Displaying 11 items

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