ggKbase home page
Advanced Search
Search Help

SCNpilot_expt_1000_bf_scaffold_0_curated_3

Organism: scnpilot_dereplicated_Sphingobacteriales_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: comp(1147..5892)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSQ1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 999.99
  • Bit_score: 844
  • Evalue 1.30e-241
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 999.99
  • Bit_score: 844
  • Evalue 4.20e-242
YD repeat protein {ECO:0000313|EMBL:ACU64500.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 999.99
  • Bit_score: 844
  • Evalue 1.90e-241

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 4746
ATGGCGAACTTGAATTGGCATATGAACAGAAAATATATAGTGTTAACCAGTTGCTGGTTGTTGTCGGGTTTGGCTATCAGTGCTCAGCAAAACAACAAACCTGCTGCTGTTACGCAAACACCTGCGGCAACCGGTCAGGTGGCATCACAGCCACCGGGATATAATGCGGTGAACATCGTTACTAATTATGTACGTACCTGGGACGCACTCGGGCCTTATCAGTCACCTACTGACCTGATGAATGCCGGTTATCAGCATGCAAAAGAAACCACCCAATACCTGGATGGATTGGGACGGCCTTTGCAAATCGTATCCCGTCAGGCCAGCCCGGGAAGCAGTCCGAAAGACCTGATAGCCCCAATAGTATATGATGCATTCGGACGGGAGTCATTTAAGTATCTCCCTTATACACAAAGCAACGGTACCACGAATGATGGGGCTTTAAGGCTTGAACCATTTGCCGATCAGGATTATTTTTATAAAAACGCGTATAAAGATGCAACAAATGCACTCATGTATGCCAATGAGCAGGCGTTGTACAGCCGTGTAGAATTTGAAGCTTCACCGTTGAACAGGGTTGTTAAAAGTTTTGCACCAGGCAATAGTTGGGCGGGCTCCTATAATCCTTCCAGCCCTGGCACTGAAAAAGCCGTGAAGCAGTTATACCTGGTGAATTCACTGAACGAGGATGATGTAAAGATCTGGACTATTGGTAATGATCCACTTAATTATGATGTAAATGGAGATGAATCAACCAATATTCCTGCCAAAGAAGCTGATCCGTATGCGCAAGGCACTTTATTTAAAAATGTAATTATTAATGAACAGGGAAATGCGATAGTGGAATATAAAGACAAGCAGGGAGTGCTGGTGTTAAGGAAAGTTCAGGTTGGTGCTATCGCTTCTGATTATAGCGGCTACACTGGTTTTTTAAGTACTTATTATGTATATGATGATATAGGAAGGCTGCGTTTTGTGATCCCTCCCAAGGCTGTTGAGGCTATCAATTCCAACTGGACATTAACCAGCTCTATTACAAAAGAACTTTGTTTTCGCTACGAGTATGACAGCCGCCAACGGTTGATCGCTAAAAAGGTACCGGGGGCCGGATGGGTTTATATGGTATATGATATGCGCAACCGGCTTGTGTTTACACAGGATGCCAATCTCCGGCAAAATAATCAATGGATGGCGACATTATATGATGTGATCAACCGCCCGGTGTTGACCGGCATCATGACGTATACAGCTTCGCCAGACGCTTTGCAAACGACTGTGAATACACTTACGACTACTCCTTCATCTAATCCCAATCCGGGTTTGCAGACAGATATTGTTTTGTCTTCAGCCAATACCAGCGGTGTTGTGCAGGCAATGCGTAGTATCACTCTTGACACAGGCTTCGAATCCGCCACCAGCGGAGAGTTTACAGCAGAGATTGTAAGCGGACCTGGCGGAGCGGATGGGGAAACCAGTTCTGTAGAAGGCATAGTGATCAATAAGAACCCCATTCCTTCCGGAGCAACTTTTATTGCGCTTACCAAAACTTATTACGATAACTACGAATGGACAAATAAAACGTATACAACAGACTGGAATAGTCAACTGAATGCCGGTAGTAGCCAGCACGCGGAAGCAATGCCTGCCCAGGCTTCCAGCCAGGTAACGGGCTTTATAACGGGTACCATGGTAAGAGTGTTGCAGGACCCGGCGAACCTGGCTGCCGGTCCGTGGTTGCCAACAGCAAATTTTTATGATGAGAAAGGAAGAGTAATACAGGCAAACAGTGATAACTATAAGAACGGGACAGATATTCTCACCAATCAATATGATTTTACCGGGAAAGTCCTGATTAACTACCAGGTATATAATACGCCCGGAGTGGCTCAGCTACGGCTGAAAACTGAGATGGTATATGATCATGGAAATCGTTTACTGGAAGTTTGGAAAACGATCAATGATGAAATAAGTAAAAAAGCCCGGATCGTGAAAAATGACTACGACGAGCTGGGGCAATTAATGACAAAACAATTAGGGCAAAAGAAGGACGCCACAACAGGAGATTATATTACCCCATCAGTACCGATTGAAACGCTTGACTATACTTACAACATCCGCGGTTGGGTGAATGGGGTCAATAAGTATTATGCGGATAAGGATGAGACAAGGGAGACCGATAGGTGGTTTGGATTTAACTTGTCGTACGATTGGGGTTTTGAGACCAATCAATACAGTGGGAATATTGGGGGTATGAAGTGGCATAGTAAAGGGGCCGGCGATATAAAAAGAGCGTATGGGTTCAGTTATGACAAAGCTGATCGCTTGCTGGGAGCAGATTTCAGCCAGGGTGAAAGCGGGTATGCAGACGATGCCACAGTGAATTTTGATATGGTGATGGGCAATGGAACAGATGCTGGCACTGCATATGATGCAAACGGAAATATTCTGAAAATGAAACAATGGGGGCTGAAGATCACGGGCAGTTCCGTTATAGATGACCTGAAGTATACGTATGAACAAACTGGTAATAGCAATAAGTTGAAAAACGTGATCGATTTTCAGAATGATGTGAATACTAATCTCGGAGATTTCAGAACAGCAACAGGGCACCCTCAGACATCCAACAAGAATACATACGTAAGTGCGGGAACCGGTGATGTAAATAGCATTATCGATTATGAATATGATAAAAACGGGAATCTTGCTTTTGATAAGAACAAGAATATAGCGGGAATCACTTACAATCACCTGAACCTCCCATCAGAAATACAGGCAAAGGATGACAATGGGAATGCAAAAGGTAAAATTGTATATATCTACGATGCAGCAGGAAATAAACTCCAAAAGAAAGTGGTGGAGTATGGGCCTGACCATGTCACCGTTGCTCAAACAACTATCACCGATTATGTGGCCGGAAGGGTGTATGAGACCAAACAAATAGCCGCAAACCCTGCGGCAGATTATGCCGATAAATTACAGTTTTTAGGCCAGGAAGAGGGACGTATCCGGGCAACATATACTAATACTTCCGATCCCAATCTGCTGACAGGTTTTGAATATGATTACATGGTAAAAGACCATCTGGGCAATGTAAGAATGGTGTTGACAGAAGAACAGCACTCCCAACTCTATCCCATTGCCAGTTTGGAAGATGCAAAGCTGTCGACTGAAGAAGGCTATTACCTGATCGATCAATCAAAGATCGTTGCTGTAAGCGACCTCACTCAACCACCGCCATCCTATGTTAATGACAATGGATTAGGTAATAACCCTGCTGATCCTGTGTTTGAAGCAGCCAACAGCGAGAAAATGTATCGTTTGAAAGGGGATGAGAATAAAACAGGCCTGGGCATTACTTTAAAAGTAATGGCTGGTGATGAGGTAAATATTCTTGGCAAAAGTTATTGGTACGAGAATACGCAGACTGCTGGCCCGAATGTAGCACCTGCTGTATTAAGCCTGTTGGAAGGGTTGTTGGGCTCACCTTCCTCCACTTTTATACCCGGTCACCTGAACGCAACAACATTGGAAGCAATACCAGGCATAAACAGCGGCCTGGATGCGTTCATCGACAGGGCAGACCGCGATGATGCGGCTTATCCCTACCGCCCCAAGGCGTTTATTAATTATGTCTTTTTGGACGAGCAGTTCCGTTATGCCGGCGGTGGTATCAGTCCTGTGAGTAGCACAGCGGGGCTTAAGGCACATACACTGACAGGGCTTGTAGTACCTAAGAATGGATATGTGTATATTTATTGTAGCAATGAAAGCGCTGTACCGGTGTTCTTTGATAATTTGCAGGTGGGGCATATCCGCGGGCCGTTATTGGAAGAGACGCATTATTATCCGTTTGGGCTTACTATGGCAGGGATATCATCGAAAGCATTGACGTTCGGAGAGCCTGAGAATAAATATAAATACAATGGTAAGGAGGAACAACGAAAAGAGTTCAGTGATGGATCAGGGCTTGAGTGGTTAGATTATGGGGCGAGGATGTATGATAACCAAGTTGGAAGATTTTTTACACAAGACAGATTTGTAGAAAAGTATCTTTCTTTAAGTCCATATAATTATGTTGCGAATAATCCAAATAGTAATATCGATGTCAACGGAGATAGCATAATCGTAGGAAGCAAAATGGTCAACGGGACTGAAGTAACTACCATTCATGTAACAGGAAAGGTCGTTAACAATTCAAGCACCCCGCTCAGTTCGGAGCAGTTGGCTGGTTATGCCAGCACGATTTCAAACGCTATAAAAGAGAATTACTCAATTACTGATGGTGATTTTACTTCAGTGGCCACAGCTGATATAACCGTTGTTAATGCGGATAATCCTCTGAGTAAAGGTGATCATGCCTTTAGAATTGTCGATGATGGAAAGGTTCCTAATGAGAATGGGAAGTTGACAAATTCAAATGGTTCGGCTCCTTTTGGCGATAATGTGGTTTATCTAAACGCTACAATTTTAGATAATAAAGAAGCTACGTCGGGACAATATGCCGGTACAGGATTAACTCAAAACGGAGATGCCACTTTAGGAAGAACGGCGACACATGAATTAGGGCATAGTGGAGGATTGGGGCATATCACACCCATCACTGACAAGCCTCGAAATCTAATGCATCAATCTAGCAACTTAACCAATGCGGGGAAAGTGTTGACGAAAGAGCAAATCCAAGAAATCCGAGGAAATTACCAAAGTGGTAGTTTAAATAGTGGTAGACAAATAAAGCTTGCATTTTAA
PROTEIN sequence
Length: 1582
MANLNWHMNRKYIVLTSCWLLSGLAISAQQNNKPAAVTQTPAATGQVASQPPGYNAVNIVTNYVRTWDALGPYQSPTDLMNAGYQHAKETTQYLDGLGRPLQIVSRQASPGSSPKDLIAPIVYDAFGRESFKYLPYTQSNGTTNDGALRLEPFADQDYFYKNAYKDATNALMYANEQALYSRVEFEASPLNRVVKSFAPGNSWAGSYNPSSPGTEKAVKQLYLVNSLNEDDVKIWTIGNDPLNYDVNGDESTNIPAKEADPYAQGTLFKNVIINEQGNAIVEYKDKQGVLVLRKVQVGAIASDYSGYTGFLSTYYVYDDIGRLRFVIPPKAVEAINSNWTLTSSITKELCFRYEYDSRQRLIAKKVPGAGWVYMVYDMRNRLVFTQDANLRQNNQWMATLYDVINRPVLTGIMTYTASPDALQTTVNTLTTTPSSNPNPGLQTDIVLSSANTSGVVQAMRSITLDTGFESATSGEFTAEIVSGPGGADGETSSVEGIVINKNPIPSGATFIALTKTYYDNYEWTNKTYTTDWNSQLNAGSSQHAEAMPAQASSQVTGFITGTMVRVLQDPANLAAGPWLPTANFYDEKGRVIQANSDNYKNGTDILTNQYDFTGKVLINYQVYNTPGVAQLRLKTEMVYDHGNRLLEVWKTINDEISKKARIVKNDYDELGQLMTKQLGQKKDATTGDYITPSVPIETLDYTYNIRGWVNGVNKYYADKDETRETDRWFGFNLSYDWGFETNQYSGNIGGMKWHSKGAGDIKRAYGFSYDKADRLLGADFSQGESGYADDATVNFDMVMGNGTDAGTAYDANGNILKMKQWGLKITGSSVIDDLKYTYEQTGNSNKLKNVIDFQNDVNTNLGDFRTATGHPQTSNKNTYVSAGTGDVNSIIDYEYDKNGNLAFDKNKNIAGITYNHLNLPSEIQAKDDNGNAKGKIVYIYDAAGNKLQKKVVEYGPDHVTVAQTTITDYVAGRVYETKQIAANPAADYADKLQFLGQEEGRIRATYTNTSDPNLLTGFEYDYMVKDHLGNVRMVLTEEQHSQLYPIASLEDAKLSTEEGYYLIDQSKIVAVSDLTQPPPSYVNDNGLGNNPADPVFEAANSEKMYRLKGDENKTGLGITLKVMAGDEVNILGKSYWYENTQTAGPNVAPAVLSLLEGLLGSPSSTFIPGHLNATTLEAIPGINSGLDAFIDRADRDDAAYPYRPKAFINYVFLDEQFRYAGGGISPVSSTAGLKAHTLTGLVVPKNGYVYIYCSNESAVPVFFDNLQVGHIRGPLLEETHYYPFGLTMAGISSKALTFGEPENKYKYNGKEEQRKEFSDGSGLEWLDYGARMYDNQVGRFFTQDRFVEKYLSLSPYNYVANNPNSNIDVNGDSIIVGSKMVNGTEVTTIHVTGKVVNNSSTPLSSEQLAGYASTISNAIKENYSITDGDFTSVATADITVVNADNPLSKGDHAFRIVDDGKVPNENGKLTNSNGSAPFGDNVVYLNATILDNKEATSGQYAGTGLTQNGDATLGRTATHELGHSGGLGHITPITDKPRNLMHQSSNLTNAGKVLTKEQIQEIRGNYQSGSLNSGRQIKLAF*