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SCNpilot_expt_1000_bf_scaffold_0_curated

Search features with annotation key words

Displaying items 1-30 of 850 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_0_curated_1
unknown

Not on your lists

comp(263..511)
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_0_curated_2
unknown

Not on your lists

comp(705..1145)
DNA (441bp) protein (147aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_0_curated_3
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1147..5892)
DNA (4746bp) protein (1582aa)
YD repeat protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PSQ1_CHIPD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ACU64500.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_0_curated_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6013..9900)
DNA (3888bp) protein (1296aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PHW1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61833.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_1000_bf_scaffold_0_curated_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9955..11394)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TDE3_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV99383.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_0_curated_6
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

11970..13700
DNA (1731bp) protein (577aa)
FAD dependent oxidoreductase n=1 Tax=Niabella soli DSM 19437 RepID=H1NUJ0_9SPHI
GMC family oxidoreductase {ECO:0000313|EMBL:KIF34680.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
FAD dependent oxidoreductase
SCNpilot_expt_1000_bf_scaffold_0_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13711..14265
DNA (555bp) protein (185aa)
Twin-arginine translocation pathway signal n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB94_NIAKG
twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AEW02477.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_0_curated_8
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

14398..15099
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SLP1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27536.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
abortive infection protein; K07052
SCNpilot_expt_1000_bf_scaffold_0_curated_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15131..16615)
DNA (1485bp) protein (495aa)
RND efflux system, outer membrane lipoprotein,NodT family n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K9I3_9BACT
Putative RND-type efflux pump outer membrane protein {ECO:0000313|EMBL:GAO44399.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
RND efflux system, outer membrane lipoprotein,NodT family
SCNpilot_expt_1000_bf_scaffold_0_curated_10
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16612..19794)
DNA (3183bp) protein (1061aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003631716
Putative RND-type efflux pump membrane protein {ECO:0000313|EMBL:GAO44400.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
SCNpilot_expt_1000_bf_scaffold_0_curated_11
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19811..20935)
DNA (1125bp) protein (375aa)
RND family efflux transporter MFP subunit n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LND1_9BACT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EJF10948.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
RND family efflux transporter MFP subunit
SCNpilot_expt_1000_bf_scaffold_0_curated_12
unknown

Not on your lists

comp(21068..21442)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_0_curated_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21499..22545)
DNA (1047bp) protein (349aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T7S9_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:ETZ19574.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
mechanosensitive ion channel MscS
SCNpilot_expt_1000_bf_scaffold_0_curated_14
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22991..25255
DNA (2265bp) protein (755aa)
Glucosylglycerol-phosphate synthase n=1 Tax=Thalassolituus oleivorans MIL-1 RepID=M5DPW9_9GAMM
Glucosylglycerol-phosphate synthase {ECO:0000313|EMBL:KIC90917.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
glucosylglycerol-phosphate synthase
SCNpilot_expt_1000_bf_scaffold_0_curated_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25290..27473
DNA (2184bp) protein (728aa)
alpha-N-acetylglucosaminidase; K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50]
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:ACU60593.1}; EC=3.2.1.50 {ECO:0000313|EMBL:ACU60593.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Alpha-N-acetylglucosaminidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF7_CHIPD">RepID=C7PPF7_CHIPD
SCNpilot_expt_1000_bf_scaffold_0_curated_16
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27475..28470)
DNA (996bp) protein (332aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)) (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
glycerol-3-phosphate dehydrogenase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237C658
SCNpilot_expt_1000_bf_scaffold_0_curated_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28655..29344
DNA (690bp) protein (230aa)
PhoB family transcriptional regulator n=1 Tax=Segetibacter koreensis RepID=UPI0003644C34
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AEW03452.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_1000_bf_scaffold_0_curated_18
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29418..29735)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPK1_MURRD
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
SCNpilot_expt_1000_bf_scaffold_0_curated_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29967..30902
DNA (936bp) protein (312aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JLF9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAO44708.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
NAD dependent epimerase/dehydratase family protein
SCNpilot_expt_1000_bf_scaffold_0_curated_20
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30928..31473)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0INY7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB30555.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
hypothetical protein; K06934
SCNpilot_expt_1000_bf_scaffold_0_curated_21
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31598..32437)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000369F16B
Putative hydrolase {ECO:0000313|EMBL:GAO44679.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
alpha/beta hydrolase
SCNpilot_expt_1000_bf_scaffold_0_curated_22
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32487..33299)
DNA (813bp) protein (271aa)
ThiJ/PfpI domain-containing protein; K05520 protease I [EC:3.2.-.-]
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D6F17
C56 family peptidase {ECO:0000313|EMBL:GAO44681.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
SCNpilot_expt_1000_bf_scaffold_0_curated_23
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33343..34095)
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000380749E
Uncharacterized protein {ECO:0000313|EMBL:GAO44680.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_0_curated_24
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34125..34697)
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037FC0B7
Uncharacterized protein {ECO:0000313|EMBL:KIC94423.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_0_curated_25
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34744..35295)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003619C7F
Cupin {ECO:0000313|EMBL:KIC94422.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
cupin 2 domain-containing protein
SCNpilot_expt_1000_bf_scaffold_0_curated_26
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35305..35529)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371D6F5
Uncharacterized protein {ECO:0000313|EMBL:GAO44675.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_0_curated_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

35843..38323
DNA (2481bp) protein (827aa)
Signal transduction histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFQ3_9BACT
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO44673.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
signal transduction histidine kinase
SCNpilot_expt_1000_bf_scaffold_0_curated_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

38320..40293
DNA (1974bp) protein (658aa)
Sigma 54 interacting domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFQ2_9BACT
Putative two-component response regulator {ECO:0000313|EMBL:GAO44674.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
Fis family transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_0_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40640..41326)
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y3T8_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ30350.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
SCNpilot_expt_1000_bf_scaffold_0_curated_30
unknown

Not on your lists

comp(41436..42371)
DNA (936bp) protein (312aa)

This feature has no annotations

Displaying items 1-30 of 850 in total

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