ggKbase home page

SCNpilot_expt_1000_bf_scaffold_0_curated_28

Organism: scnpilot_dereplicated_Sphingobacteriales_1

near complete RP 52 / 55 BSCG 50 / 51 ASCG 13 / 38
Location: 38320..40293

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 interacting domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GFQ2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.6
  • Coverage: 656.0
  • Bit_score: 745
  • Evalue 3.50e-212
Putative two-component response regulator {ECO:0000313|EMBL:GAO44674.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 648.0
  • Bit_score: 777
  • Evalue 2.00e-221
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 652.0
  • Bit_score: 736
  • Evalue 8.80e-210

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1974
ATGAATAGTATGACCAGGAAAATATTGATTGTGGAGGATGAGTTCATCGTTGCCAATGACTTGCGGTTGTTGCTATTACAGGCAGGGCACAAAGTGACCGGTATTGCCGTTTCGGCAGAAGAAGCGGAAGAGCTTCTTCAACAACAGAAACCTGATATGGTGATTGTTGATATCATCCTCGAAGGAAATTTATCAGGGATCGATCTTGCCAGAAAATTACGTGCAGAGAATATTGCTTTTGTTTACTTGTCTGCAAATTCAAACCAGGAGATACTGGAGCAGGCAAAAGCGACAGAGCCCTATGGCTTCCTTGTCAAGCCTTTCCGGGAACAGGATCTGCTCATCACACTGGATATAGCCTGGTATCTGCATACACACAGTCTTGAAGCAAAATTTCGGCGTGAAGAACTGCTCCAAAAGCGTTTGACAGAAATCGGCCAGGAAACTACGGATGCTGCAGATAAACTGCTGAAGGTCGCCAGAACGCTTCAATCATTTATTCCGTTTGATCTGATTACTTCAGGTGTGCGCCCGGCTGATCACGAAGAGTTTGGTGATATCGCCTATGTAAGAATCGGTTTTGACGAATATCAGTTCATCGGGAAAACAGAGCTGGAAACAATTACGAGCATTAATAAAAAACAACTTGCTGCTATCAGTAAAAATAACCGCGTCGACACATCGCCTGCTATCTGCAACCTGGAGGCGGAGATCAAAAGAAAAACAAATCCCTCGCTGCAGGGTATAATAGCGTATCATTTCCGGCAAAGAGCAGTACTCATTTTCCCGGTCGCACTTGGCTATGGTCTTTCTCTTCACTATTGTTTATACAGCCGGCAGCCGCAAGCATATACAAAAGATCATATCGACCTGTTGAACCGGTTAAAACCTTCGCTTGAGCAACTGGCAGAACAAACAATCCACTATCCAGCATCCGCAAAACCAACACACAGTTTACCTGCCGCTGCCAAACCCCTGCGTGATGCTGTTGCGAATGCCGCATTCGGCAGTATCATCGGCAGCCATTATCTGCTGCTGGCAGCATTGGACCTTGCAGCACAGGTCGCGCCATACAGCACCTCCGTATTGTTGCTTGGGGAGAGTGGCACAGGAAAAGAAAGAGTCGCCCAGCTTATCCATTCACTTTCACCGAGGCGAAATGGGCCGTTTATAAAAGTAAACTGTGCCGCCATTCCCCCTACCCTTATCGAGTCGGAATTATTTGGTCATGAAAAAGGTGCATTCACCGGAGCCATTGAAAAGAGAAAGGGAAAATTTGAACTGGCAAATGCCGGAACGATTTTTCTGGACGAGATCGGCGAATTGCCGGTTGCTATGCAGGTGAAATTACTACGTGTGCTGCAGGAAAGAGAACTGGAGTATGTAGGTGGCACTGCTCCTATAAAAGTAGACGTGCGGATCATTACCGCCACACACCGCAATCTCGAAAAAGAAGTAGGCGAAGGAAATTTCAGGCTTGATCTTTATTACCGGCTGAATGTATTCCCCATCACGCTGCCGCCATTGCGCGAACGGAGATCGGATATACCAGCACTGGCCGACTATTTCGCCAACAAGTTCTGCAGATCGTTCAACAAACCATTCAATGGCATTACCGCATTCATGTCGGAAAAATTGTATGCCTACCACTGGCCGGGCAATATACGCGAACTGGAAAACGTCCTGGAACAGGCTGTTGTGCTGAATGACGGGTGCTCACCATTGGATCTCACAAGAAAACTTTCAACAGGCGTATCAAAACCTCCGGTTGATATCACATTAAACAATCTTGAAGAAATACGCCAAACACAACGGGAAACAGAAAGAGCATATATCATCGCGGCCCTTAAACAAACCCGGGGAAGGATCAGGGGAACTAATGGCGCTGCCGAATTATTGAAGATCAAGCCAACCACACTGGAATCAAAAATGGCAAGATTTAATATTAACCGGCTCGATTTTATGGAACCATAA
PROTEIN sequence
Length: 658
MNSMTRKILIVEDEFIVANDLRLLLLQAGHKVTGIAVSAEEAEELLQQQKPDMVIVDIILEGNLSGIDLARKLRAENIAFVYLSANSNQEILEQAKATEPYGFLVKPFREQDLLITLDIAWYLHTHSLEAKFRREELLQKRLTEIGQETTDAADKLLKVARTLQSFIPFDLITSGVRPADHEEFGDIAYVRIGFDEYQFIGKTELETITSINKKQLAAISKNNRVDTSPAICNLEAEIKRKTNPSLQGIIAYHFRQRAVLIFPVALGYGLSLHYCLYSRQPQAYTKDHIDLLNRLKPSLEQLAEQTIHYPASAKPTHSLPAAAKPLRDAVANAAFGSIIGSHYLLLAALDLAAQVAPYSTSVLLLGESGTGKERVAQLIHSLSPRRNGPFIKVNCAAIPPTLIESELFGHEKGAFTGAIEKRKGKFELANAGTIFLDEIGELPVAMQVKLLRVLQERELEYVGGTAPIKVDVRIITATHRNLEKEVGEGNFRLDLYYRLNVFPITLPPLRERRSDIPALADYFANKFCRSFNKPFNGITAFMSEKLYAYHWPGNIRELENVLEQAVVLNDGCSPLDLTRKLSTGVSKPPVDITLNNLEEIRQTQRETERAYIIAALKQTRGRIRGTNGAAELLKIKPTTLESKMARFNINRLDFMEP*