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SCNpilot_expt_500_bf_scaffold_139_curated

Search features with annotation key words

Displaying items 1-30 of 77 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_500_bf_scaffold_139_curated_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

175..1005
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YGV3_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ26382.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1456..2940)
DNA (1485bp) protein (495aa)
deoxyribodipyrimidine photolyase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B571FF
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:KIC89092.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
deoxyribodipyrimidine photolyase-related protein
SCNpilot_expt_500_bf_scaffold_139_curated_3
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2995..5358)
DNA (2364bp) protein (788aa)
TonB-dependent receptor n=1 Tax=Niabella soli DSM 19437 RepID=H1NN17_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KFF13437.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
TonB-dependent receptor
SCNpilot_expt_500_bf_scaffold_139_curated_4
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5514..6056
DNA (543bp) protein (181aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDF0_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:CCH51924.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
SCNpilot_expt_500_bf_scaffold_139_curated_5
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6053..6850
DNA (798bp) protein (266aa)
Putative transmembrane anti-sigma factor n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNS5_SPILD
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ADB40611.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_500_bf_scaffold_139_curated_6
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6866..7666
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QNS7_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB40613.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;"
SCNpilot_expt_500_bf_scaffold_139_curated_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7728..8180
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKH1_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97627.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_139_curated_8
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8578..9681)
DNA (1104bp) protein (368aa)
HEAT domain containing protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE65_FLAJ1
heat domain-containing protein
HEAT domain containing protein {ECO:0000313|EMBL:ABQ06503.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_139_curated_9
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9755..10318)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000349F621
Uncharacterized protein {ECO:0000313|EMBL:EJG02424.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_10
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10359..10748)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZE8_DYAFD
Uncharacterized protein {ECO:0000313|EMBL:CEJ69280.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_11
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10759..11352)
DNA (594bp) protein (198aa)
PF08818 domain protein n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0FF76_9LEPT
PF08818 domain protein {ECO:0000313|EMBL:EQA46262.1}; TaxID=1049789 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11358..11825)
DNA (468bp) protein (156aa)
ATPase {ECO:0000313|EMBL:KIC95422.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Uncharacterized protein id=4334645 bin=GWF2_Bacteroidetes_42_66 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
activator of Hsp90 ATPase 1 family protein
SCNpilot_expt_500_bf_scaffold_139_curated_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11835..12155)
DNA (321bp) protein (107aa)
Transcriptional regulator, ArsR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PM49_CHIPD
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ACU62263.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_139_curated_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12248..13102
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PRE4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC23342.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_15
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13184..13474
DNA (291bp) protein (97aa)
Acetyltransferase-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FC77_FLAJ1
acetyltransferase-like protein
Acetyltransferase-like protein {ECO:0000313|EMBL:ABQ07188.1}; TaxID=376686 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
SCNpilot_expt_500_bf_scaffold_139_curated_16
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13552..14805)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEB4_SPHS2
hypothetical protein; K06889
Uncharacterized protein {ECO:0000313|EMBL:ADZ79015.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_139_curated_17
Flavobacterium sp. 316, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14875..15564)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Flavobacterium cauense R2A-7 RepID=V6S2Q1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIX21857.1}; TaxID=1603293 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. 316.;"
SCNpilot_expt_500_bf_scaffold_139_curated_18
unknown

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comp(15762..16076)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_139_curated_19
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16125..16892)
DNA (768bp) protein (256aa)
prophage antirepressor id=7718643 bin=BACIGN_2 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Anti-repressor protein {ECO:0000313|EMBL:EOA57431.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
KilA
SCNpilot_expt_500_bf_scaffold_139_curated_20
unknown

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comp(17587..17868)
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_expt_500_bf_scaffold_139_curated_21
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17913..18674
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJT1_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU58272.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_139_curated_22
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18723..19418)
DNA (696bp) protein (232aa)
Thioredoxin domain-containing protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IIE8_FLUTR
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:ACU64299.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_139_curated_23
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19415..20398)
DNA (984bp) protein (328aa)
Transcriptional regulator, AraC family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C8E3_SPHS2
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ADZ80217.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_expt_500_bf_scaffold_139_curated_24
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20565..21335
DNA (771bp) protein (257aa)
Putative signal transduction histidine kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK18_NIAKG
Putative two-component histidine kinase {ECO:0000313|EMBL:GAO44882.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
putative signal transduction histidine kinase
SCNpilot_expt_500_bf_scaffold_139_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21328..21996
DNA (669bp) protein (223aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK19_NIAKG
two component transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEW02957.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_expt_500_bf_scaffold_139_curated_26
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22285..22941
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Gallibacterium anatis 12656/12 RepID=U1GZE6_9PAST
Uncharacterized protein {ECO:0000313|EMBL:KJV36951.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23554..24504
DNA (951bp) protein (317aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQK7_CHIPD
alkyl hydroperoxide reductase
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACU60630.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_expt_500_bf_scaffold_139_curated_28
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24536..27721
DNA (3186bp) protein (1062aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM0_9SPHI
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ25091.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-linked outer membrane protein, SusC/RagA family
SCNpilot_expt_500_bf_scaffold_139_curated_29
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27740..29080
DNA (1341bp) protein (447aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YBM1_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ25092.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
hypothetical protein
SCNpilot_expt_500_bf_scaffold_139_curated_30
unknown

Not on your lists

comp(29151..29480)
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying items 1-30 of 77 in total

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