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SCNpilot_expt_500_bf_scaffold_2424_curated_4

Organism: scnpilot_dereplicated_Sphingobacteriales_7

near complete RP 53 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 1141..1986

Top 3 Functional Annotations

Value Algorithm Source
regulatory protein RteC family protein n=1 Tax=Empedobacter brevis RepID=UPI00037ED746 similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 281.0
  • Bit_score: 508
  • Evalue 4.00e-141
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:AIM38363.1}; TaxID=1538644 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. ML3W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 281.0
  • Bit_score: 504
  • Evalue 1.10e-139
RteC protein similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 281.0
  • Bit_score: 499
  • Evalue 7.70e-139

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Taxonomy

Sphingobacterium sp. ML3W → Sphingobacterium → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 846
ATGAAATACTCTCTACAAACCATTATCCTGGAAATCCATAATAAAGAGGACAAGGTTTCCTTGCAAAGTAAAAGGTTAATCGATGAGGCTTATGAGATGACCTTGTATCTCCAGGAATTACTTTTTTCAGTGAAAGAACTTATCGTTAAAGAAGGATTCAAGGACGAAGCTGAGGAGATACATTTCTTCCGGACGGTGAAACCCCAAATACTGGGGAAACTGATTTATTATAATAAGGTATATCGTATAGAAACTACCTGCCCCGTAAGCAATGGTAAGATGTATTATAGTTACTTCTCTACACAGTTGGCTAATTTGAAGCGTGAGTATATTGAGAACATTTGCAATACGGATTTTTACCGGTATTATCGTTCAGGTCGTACAGATCGTGATGATACTTATTTTAAGCGGGGCCATATAAATTACCATGATGGTCTTAACAGCATTGTTTTTGAAATTGACCCAACGTTTGCAACGTTCTATGATTACAAAATAGCGAGGATTATTGCAAACGAGTTGCTTTACACTTATCTGCTGACAAAGATCAATCCCGATGAAAATCCCGATATGATCCTACAAAAGCCAGAATCCACGAAAGATATATTTTGGACGGAATCCAAAAATGCGCTGATTGAATTGATCTACGCCCTTCATGCTTCCGGAGCCATTTCACACGGTAAAATCGGTATTAGAAAAATAAGCCTCATGTTCCAGATACTGTTCCGCATTCCTCTTGGAGATCTGCATCATGCCTTCCACCGGATGAAAACCCGTTCAGGCTCCAAGACGGCGTTTTTAGATCAGCTCAAACAATCACTGGAAGAATATATGGACAAGAATTTATAA
PROTEIN sequence
Length: 282
MKYSLQTIILEIHNKEDKVSLQSKRLIDEAYEMTLYLQELLFSVKELIVKEGFKDEAEEIHFFRTVKPQILGKLIYYNKVYRIETTCPVSNGKMYYSYFSTQLANLKREYIENICNTDFYRYYRSGRTDRDDTYFKRGHINYHDGLNSIVFEIDPTFATFYDYKIARIIANELLYTYLLTKINPDENPDMILQKPESTKDIFWTESKNALIELIYALHASGAISHGKIGIRKISLMFQILFRIPLGDLHHAFHRMKTRSGSKTAFLDQLKQSLEEYMDKNL*