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SCNpilot_cont_1000_p_scaffold_26_curated

Search features with annotation key words

Displaying items 1-30 of 499 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_26_curated_1
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23..355)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YIA7_9SPHI
Putative uncharacterized protein {ECO:0000313|EMBL:EHQ27520.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
conjugate transposon protein
SCNpilot_cont_1000_p_scaffold_26_curated_2
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(366..671)
DNA (306bp) protein (102aa)
Carbamoyl phosphate synthetase {ECO:0000313|EMBL:KFF16578.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aquatilis).;"
hypothetical protein
Conjugative transposon protein TraE id=1829078 bin=GWE2_Bacteroidetes_29_8 species=Flavobacterium frigoris genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
SCNpilot_cont_1000_p_scaffold_26_curated_3
unknown

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comp(823..993)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_4
unknown

Not on your lists

comp(1218..1430)
DNA (213bp) protein (71aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1658..2467)
DNA (810bp) protein (270aa)
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33B5B
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:EHQ24765.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RteC protein.
SCNpilot_cont_1000_p_scaffold_26_curated_6
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2609..3190)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003818EA4
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:AIZ63951.1}; TaxID=1385664 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
putative transcriptional regulator, Crp/Fnr family
SCNpilot_cont_1000_p_scaffold_26_curated_7
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3507..4931
DNA (1425bp) protein (475aa)
Uncharacterized protein {ECO:0000313|EMBL:AIL46559.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_cont_1000_p_scaffold_26_curated_8
unknown

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4943..5320
DNA (378bp) protein (126aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_9
unknown

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comp(5724..6026)
DNA (303bp) protein (101aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6083..6991)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGB4_NIAKG
hypothetical protein; K07029
Uncharacterized protein {ECO:0000313|EMBL:AEW02753.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7142..8191)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC0_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02759.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8635..10443
DNA (1809bp) protein (603aa)
GTP-binding protein TypA n=1 Tax=Segetibacter koreensis RepID=UPI000361BF38
GTP-binding protein TypA {ECO:0000313|EMBL:KIC95234.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
GTP-binding protein TypA; K06207 GTP-binding protein
SCNpilot_cont_1000_p_scaffold_26_curated_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10484..10702
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGC8_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC91167.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_26_curated_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10775..11677
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Prevotella sp. C561 RepID=G1VG56_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KIC92902.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
group 2 family glycosyltransferase
SCNpilot_cont_1000_p_scaffold_26_curated_15
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11685..14048)
DNA (2364bp) protein (788aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PBN4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU63098.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_p_scaffold_26_curated_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14145..15056)
DNA (912bp) protein (304aa)
LAO/AO transport system ATPase; K07588 LAO/AO transport system kinase [EC:2.7.-.-]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037B2E26
Transporter {ECO:0000313|EMBL:KIC95156.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_p_scaffold_26_curated_17
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15089..15877
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI0003825CE2
family 2 glycosyl transferase
Tax=RBG_13_Bacteroidetes_43_22_curated
SCNpilot_cont_1000_p_scaffold_26_curated_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15855..16556
DNA (702bp) protein (234aa)
Peptidase S16 lon domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD2_NIAKG
peptidase S16 lon domain-containing protein; K07157
Peptidase S16 lon domain protein {ECO:0000313|EMBL:AEW02771.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_19
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16568..17296
DNA (729bp) protein (243aa)
putative Baf family transcriptional acitvator; K03525 type III pantothenate kinase [EC:2.7.1.33]
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Type III pantothenate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD3_NIAKG
SCNpilot_cont_1000_p_scaffold_26_curated_20
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17268..17858
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000373F4FC
Uncharacterized protein {ECO:0000313|EMBL:GAO42069.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_26_curated_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17883..18866
DNA (984bp) protein (328aa)
Aldo/keto reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THC8_NIAKG
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AEW02774.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_22
unknown

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18989..19552
DNA (564bp) protein (188aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19696..20340
DNA (645bp) protein (215aa)
Transcriptional regulator, TetR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD1_NIAKG
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AEW02777.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20352..21683
DNA (1332bp) protein (444aa)
Outer membrane efflux protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD2_NIAKG
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEW02778.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21805..22854
DNA (1050bp) protein (350aa)
Secretion protein HlyD family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD3_NIAKG
secretion protein HlyD family protein; K03543 multidrug resistance protein A
Secretion protein HlyD family protein {ECO:0000313|EMBL:AEW02779.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22872..24419
DNA (1548bp) protein (516aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD4_NIAKG
EmrB/QacA subfamily drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:AEW02780.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_p_scaffold_26_curated_27
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25041..25865
DNA (825bp) protein (275aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THD6_NIAKG
Short-chain dehydrogenase {ECO:0000313|EMBL:KIC91177.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
short-chain dehydrogenase/reductase SDR; K13775 citronellol/citronellal dehydrogenase
SCNpilot_cont_1000_p_scaffold_26_curated_28
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(26102..26476)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000382570D
DoxX family protein
Tax=RBG_13_Ignavibacteria_36_8_curated
SCNpilot_cont_1000_p_scaffold_26_curated_29
unknown

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comp(26559..26789)
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_26_curated_30
unknown

Not on your lists

26805..27011
DNA (207bp) protein (69aa)

This feature has no annotations

Displaying items 1-30 of 499 in total

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