ggKbase home page

SCNpilot_expt_1000_bf_scaffold_698_curated

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_698_curated_1
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29..2305)
DNA (2277bp) protein (759aa)
Phage-related protein tail component-like protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T644_CAUSK
Phage-like protein tail component-like protein
Phage-related protein tail component-like protein {ECO:0000313|EMBL:ABZ72625.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_2
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2329..3093)
DNA (765bp) protein (255aa)
NLP/P60 protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T643_CAUSK
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:ABZ72624.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3098..3610)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T642_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72623.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_4
unknown

Not on your lists

comp(3610..3942)
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3942..6566)
DNA (2625bp) protein (875aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T640_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72621.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_6
unknown

Not on your lists

comp(7057..7407)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_7
unknown

Not on your lists

comp(7465..7926)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_8
unknown

Not on your lists

comp(7995..8354)
DNA (360bp) protein (120aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_9
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8351..8689)
DNA (339bp) protein (113aa)
Phage protein, HK97 gp10 family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T636_CAUSK
HK97 family phage protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
SCNpilot_expt_1000_bf_scaffold_698_curated_10
unknown

Not on your lists

comp(8686..9000)
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_11
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9000..9572)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T634_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72615.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9647..10879)
DNA (1233bp) protein (411aa)
Phage major capsid protein, HK97 family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T632_CAUSK
HK97 family phage major capsid protein
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:ABZ72613.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_13
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10991..11785)
DNA (795bp) protein (265aa)
Phage prohead protease, HK97 family n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T631_CAUSK
HK97 family phage prohead protease; K06904
Phage prohead protease, HK97 family {ECO:0000313|EMBL:ABZ72612.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_14
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11775..13103)
DNA (1329bp) protein (443aa)
Portal protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T630_CAUSK
portal protein
Portal protein {ECO:0000313|EMBL:ABZ72611.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_15
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13140..14648)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T629_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72610.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_16
unknown

Not on your lists

comp(14641..15150)
DNA (510bp) protein (170aa)
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_698_curated_17
unknown

Not on your lists

15253..15567
DNA (315bp) protein (105aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_18
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15691..16026
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZD1_SPHJU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KER35174.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
SCNpilot_expt_1000_bf_scaffold_698_curated_19
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16019..16279
DNA (261bp) protein (87aa)
Xre-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YZD0_SPHJU
XRE family transcriptional regulator; K07726 putative transcriptional regulator
Xre-family transcriptional regulator {ECO:0000313|EMBL:BAI95712.1}; TaxID=452662 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum (strain NBRC 101211 / UT26S).;"
SCNpilot_expt_1000_bf_scaffold_698_curated_20
unknown

Not on your lists

16313..16402
DNA (90bp) protein (30aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_21
unknown

Not on your lists

comp(16499..16765)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_22
unknown

Not on your lists

comp(16859..16996)
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_23
unknown

Not on your lists

comp(16993..17133)
DNA (141bp) protein (47aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_24
unknown

Not on your lists

comp(17130..17333)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_25
unknown

Not on your lists

comp(17330..17500)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_26
unknown

Not on your lists

comp(17497..17763)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_27
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18933..19409)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0K7B2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB32544.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
SCNpilot_expt_1000_bf_scaffold_698_curated_28
unknown

Not on your lists

comp(19402..19755)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_29
unknown

Not on your lists

comp(19752..20114)
DNA (363bp) protein (121aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_698_curated_30
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20242..20766
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HGL6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB11243.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
integrase family protein
Displaying items 1-30 of 45 in total

View Taxonomy