ggKbase home page

SCNpilot_expt_1000_bf_scaffold_661_curated_28

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(31541..31825)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISH0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 162
  • Evalue 2.40e-37
ihfB; integration host factor subunit beta; K05788 integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 162
  • Evalue 7.50e-38
Integration host factor subunit beta {ECO:0000313|EMBL:BAK66330.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 91.0
  • Bit_score: 162
  • Evalue 3.40e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
ATGATTCGTTCGGAGCTGGTGCAGAAACTGGCAGCGCTCAATCCGGGCCTGACCCTTCAGGAAGTCGATCGGATTGTCGATATCGTTTTCGATTCGATCGGATCGCGATTGGCTGACGGTGGTCGCGTCGAACTGCGCGGCTTCGGCGCCTTCACCACCCGCGCGCGCGAGGGTCGCACGGGCCGGAACCCCCGCACCGGCGCGGCCGTGGTGGTGCCCTCCAAGCGGGTGCCGCACTTCAAGCCCGGTAAGGAAATGCGCAACCGCCTCAACGGTCACGGCTGA
PROTEIN sequence
Length: 95
MIRSELVQKLAALNPGLTLQEVDRIVDIVFDSIGSRLADGGRVELRGFGAFTTRAREGRTGRNPRTGAAVVVPSKRVPHFKPGKEMRNRLNGHG*