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SCNpilot_expt_1000_bf_scaffold_661_curated_29

Organism: scnpilot_dereplicated_Sphingobium_2

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(32047..33753)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISH1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 568.0
  • Bit_score: 1051
  • Evalue 0.0
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 568.0
  • Bit_score: 1051
  • Evalue 0.0
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 95.1
  • Coverage: 568.0
  • Bit_score: 1051
  • Evalue 0.0

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1707
ATGGCCTCAACGGCATTTCCCTCCCGCGACGATTTCGCGTCGCTCCTCAATGAATCACTCGGCGGTGCCGAGGGCGGCTTCGAAGGCCGCGTGGTCAAGGGCACCGTCACCGCAATCGAAAACGATCTTGCCGTCATCGACGTCGGCCTCAAGAGCGAAGGCCGCGTGCCGCTGCGCGAGTTCGCCGCGCCGGGCCAGAAGGCCGACCTGAAGGTCGGTGACGAGGTCGAGGTTTATGTCGACCGCGTCGAGAACAGCAACGGCGAGGCCATGCTGAGCCGCGATCGCGCCCGCCGCGAAGCCGCGTGGGACAAGCTGGAATCCGAGTTTGCCGAGAACAGCCGCGTCGAGGGCGTCATCTTCGGCCGCGTCAAGGGCGGCTTCACCGTCGATCTGGACGGCGCCGTGGCGTTCCTCCCCGGCAGCCAGGTGGATATCCGCCCCGTCCGCGACGTCACCCCGCTCATGGACATTCCGCAGCCCTTCCAGATCCTCAAGATGGATCGCCGCCGCGGCAACATCGTCGTGTCGCGCCGCGCCATTCTGGAAGAAACCCGCGCCGAGCAGCGCAGCGGCCTCATCCAGACCCTGTCGGAAGGTCAGATCATCGACGGCGTGGTCAAGAACATCACCGATTACGGTGCGTTCGTCGACTTGGGCGGCATCGACGGCCTGCTGCACGTCACCGATCTCAGCTACAAGCGGATCAACCACCCGAGCGAGATGATCAACATCGGCGATACCGTCCGCGTGCAGATCATCCGCATCAATCGCGACACGCAGCGCATCAGCCTCGGCATGAAGCAGCTTGAGAGCGATCCGTGGGAGGGCGCATCGGCCAAGTATCCGGTTGGTGCCAAGCTGACCGGCCGCGTCACGAACATCACCGAATATGGTGCCTTCGTGGAACTGGAGCCGGGCATCGAGGGCCTTGTCCACGTCTCCGAGATGAGCTGGACCAAGAAGAACGTCCACCCCGGCAAAATCGTCTCGACCAGCCAGGAAGTCGACGTGCTCGTGCTGGAAGTGGACGCCGAGAAGCGCCGCATCAGCCTGGGCCTCAAGCAGGCTCAGTCCAACCCGTGGGAGAGCTTCGCGGAGCGTCACCCGGTCGGCAGCCAGGTCGAGGGCGAAGTCAAGAACGCCACCGAGTTCGGCCTGTTCATCGGCTTGGACGGCGACGTGGACGGCATGGTCCACATGTCGGACATCGCCTGGGGCATCTCCGGCGAGGACGCGCTCAACCTGCACCGCAAGGGCGAGACCGTCACCGCCATCGTGCTCGACGTGGACGTCGAGAAGGAGCGCATCAGCCTCGGCATGAAGCAGCTTGAGAAGGGCGCGCCGGCAGTCGGCGTGGGCCGTTCGGGCAGCAGCGGTCTCCAGAAGAACGAGACCGTCACCGTCACCGTGCTCGAAGTGCGTGACGGCGGGCTTGAGGTGCAGGCGGGCGACGATGGCGTCACCGGCTTCATCAAGCGCAGCGACCTGGGCCGCGACCGCGACGAGCAGCGTCCGGACCGCTTCCAGGTCGGCCAGAAGTTCGACGCGATGGTGATCGGCTTCGATCGTTCCAAGAAGCCGAACTTCTCGGTCAAGGCGCTTCAAATCGCCGAGGAGAAGCAAGCGGTTGCGCAATATGGCTCGTCGGACAGCGGCGCATCGCTGGGCGACATTCTGGGCGAGGCGCTCAAGGCCAAGGGCTGA
PROTEIN sequence
Length: 569
MASTAFPSRDDFASLLNESLGGAEGGFEGRVVKGTVTAIENDLAVIDVGLKSEGRVPLREFAAPGQKADLKVGDEVEVYVDRVENSNGEAMLSRDRARREAAWDKLESEFAENSRVEGVIFGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRAILEETRAEQRSGLIQTLSEGQIIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPSEMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGASAKYPVGAKLTGRVTNITEYGAFVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVLVLEVDAEKRRISLGLKQAQSNPWESFAERHPVGSQVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALNLHRKGETVTAIVLDVDVEKERISLGMKQLEKGAPAVGVGRSGSSGLQKNETVTVTVLEVRDGGLEVQAGDDGVTGFIKRSDLGRDRDEQRPDRFQVGQKFDAMVIGFDRSKKPNFSVKALQIAEEKQAVAQYGSSDSGASLGDILGEALKAKG*