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scnpilot_p_inoc_scaffold_3947_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3947_curated_1
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..275
DNA (273bp) protein (91aa)
DNA polymerase III subunit alpha {ECO:0000313|EMBL:AKH41740.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AKH41740.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
DNA polymerase III subunit alpha (EC:2.7.7.7); K02337 DNA polymerase III subunit alpha [EC:2.7.7.7]
DNA polymerase III subunit alpha n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HX50_9SPHN
scnpilot_p_inoc_scaffold_3947_curated_2
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(272..643)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ILG8_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK65231.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
scnpilot_p_inoc_scaffold_3947_curated_3
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(705..1832)
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGV6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA93800.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
scnpilot_p_inoc_scaffold_3947_curated_4
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1907..2869)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8S9H7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU09504.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3947_curated_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3092..3619)
DNA (528bp) protein (176aa)
Molybdopterin binding domain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7F5_NOVAD
molybdopterin binding domain-containing protein; K03638 molybdenum cofactor biosynthesis protein B
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
scnpilot_p_inoc_scaffold_3947_curated_6
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3674..5434)
DNA (1761bp) protein (587aa)
Lytic murein transglycosylase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NA11_ERYLH
Lytic murein transglycosylase {ECO:0000313|EMBL:KHL25801.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
lytic murein transglycosylase
scnpilot_p_inoc_scaffold_3947_curated_7
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5436..6206)
DNA (771bp) protein (257aa)
hypothetical protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7]
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRL1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48004.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
scnpilot_p_inoc_scaffold_3947_curated_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6294..7940
DNA (1647bp) protein (549aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1); K00311 electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
Electron-transferring-flavoprotein dehydrogenase {ECO:0000313|EMBL:KHS48291.1}; EC=1.5.5.1 {ECO:0000313|EMBL:KHS48291.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
Electron-transferring-flavoprotein dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7F2_NOVAD
scnpilot_p_inoc_scaffold_3947_curated_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7995..8426
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2NA14_ERYLH
Uncharacterized protein {ECO:0000313|EMBL:EZP84626.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3947_curated_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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9118..9873
DNA (756bp) protein (252aa)
Putative N-formylglutamate amidohydrolase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4J8_9SPHN
Putative N-formylglutamate amidohydrolase {ECO:0000313|EMBL:GAD48001.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
N-formylglutamate amidohydrolase
scnpilot_p_inoc_scaffold_3947_curated_11
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10138..11994
DNA (1857bp) protein (619aa)
Dihydroxy-acid dehydratase {ECO:0000313|EMBL:AKH41728.1}; EC=4.2.1.9 {ECO:0000313|EMBL:AKH41728.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9]
Dihydroxy-acid dehydratase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0ICE5_9SPHN
scnpilot_p_inoc_scaffold_3947_curated_12
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12082..12471
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3AJI6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KHK91717.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3947_curated_13
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12455..12979
DNA (525bp) protein (175aa)
YjeF-related protein-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EHU8_9SPHN
Sugar kinase {ECO:0000313|EMBL:KHK91716.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
hypothetical protein
Displaying 13 items

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