ggKbase home page

SCNpilot_cont_300_bf_scaffold_12182_curated

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_12182_curated_1
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..313)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003722D2A
TonB-dependent receptor
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
SCNpilot_cont_300_bf_scaffold_12182_curated_2
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

452..805
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI00036ED299
Transposase IS3/IS911 {ECO:0000313|EMBL:EZP83428.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
transposase IS3/IS911 family protein; K07483 transposase
SCNpilot_cont_300_bf_scaffold_12182_curated_3
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

802..1143
DNA (342bp) protein (114aa)
IS66 Orf2 family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VHC5_SPHWW
IS66 Orf2 family protein; K07484 transposase
IS66 Orf2 family protein {ECO:0000313|EMBL:ABQ71691.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
SCNpilot_cont_300_bf_scaffold_12182_curated_4
Sphingobium chinhatense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1203..2828
DNA (1626bp) protein (542aa)
transposase IS66 n=1 Tax=Sphingobium xenophagum RepID=UPI000363D7A4
Transposase IS66 {ECO:0000313|EMBL:EPR14881.1}; TaxID=1346790 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chinhatense IP26.;"
transposase IS66
Displaying 4 items

View Taxonomy