name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_473_curated_1
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..145)
|
cold-shock protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C064
Uncharacterized protein {ECO:0000313|EMBL:GAM01119.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
cspA; cold shock protein CspA; K03704 cold shock protein (beta-ribbon, CspA family)
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_2
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
512..1132
|
3''''-5'''' exonuclease n=1 Tax=Sphingomonas melonis RepID=UPI000380B202
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26138.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_3
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1125..1763
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3CA94
Sphingomonas taxi strain 30a NODE_34, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26170.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1772..2347
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00036EBB4E
DNA, contig: SP622 {ECO:0000313|EMBL:GAN13581.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
OstA family protein; K09774 lipopolysaccharide export system protein LptA
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_5
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2411..3214
|
ABC transporter; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-]
ABC transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0P8_9SPHN
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:GAM01123.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_6
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3267..4712
|
RNA polymerase factor sigma-54 (EC:2.7.7.6)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00038072DD
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_7
Sphingobium lucknowense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4822..5682)
|
LysR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9BB
LysR family transcriptional regulator {ECO:0000313|EMBL:KER36840.1}; TaxID=1450518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lucknowense F2.;"
LysR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5812..7308
|
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AFADE
Sphingomonas taxi strain 30a NODE_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIU28331.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_9
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7418..7726)
|
Excinuclease ABC, C subunit domain protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQD0_9SPHN
Excinuclease ABC, C subunit domain protein {ECO:0000313|EMBL:CCW19430.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
putative endonuclease; K07461 putative endonuclease
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7827..8972
|
Acyl-CoA dehydrogenase; K00249 acyl-CoA dehydrogenase [EC:1.3.99.3]
acyl-CoA dehydrogenase n=1 Tax=Sphingomonas echinoides RepID=UPI00026C92F9
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_11
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8969..10003
|
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
enoyl-CoA hydratase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037E293A
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30135.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_12
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10122..10904
|
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETI58983.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETI58983.1};; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
paaG; enoyl-CoA hydratase (EC:4.2.1.17)
UPI0003D59E25 related cluster n=1 Tax=unknown RepID=UPI0003D59E25
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11091..11975
|
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Sphingomonas melonis RepID=UPI000364C2F5
3-hydroxyisobutyrate dehydrogenase
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_14
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11972..12445
|
nucleoside diphosphate kinase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B384E4
Nucleoside diphosphate kinase {ECO:0000313|EMBL:KHK91714.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
GreA/GreB family elongation factor
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_15
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12594..14201
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000381106C
Major facilitator transporter {ECO:0000313|EMBL:AJP70955.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
general substrate transporter
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_16
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14242..15267
|
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
alanine racemase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CA63C
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15274..15660)
|
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S394_9SPHN
Lactoylglutathione lyase and related lyases {ECO:0000313|EMBL:GAO53692.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glyoxalase/bleomycin resistance protein/dioxygenase
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_18
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15657..16436)
|
acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
acetyl-CoA acetyltransferase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288A05B
Acetyl-CoA acetyltransferases family protein {ECO:0000313|EMBL:EZP56519.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17761..18300
|
poly (3-hydroxybutyrate) depolymerase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B55ACF
Sphingomonas taxi strain 30a NODE_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27366.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
polyhydroxyalkonate synthesis repressor PhaR
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_20
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18425..19618)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000376E8B6
Uncharacterized protein {ECO:0000313|EMBL:GAM00830.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_21
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19800..21242)
|
CpaF protein secretory protein kinase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F7E53
Type II/IV secretion system family protein {ECO:0000313|EMBL:EZP55378.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
type II secretion system protein E
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_22
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21304..22332)
|
AraC family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002884AD2
6-O-methylguanine DNA methyltransferase {ECO:0000313|EMBL:AIT06696.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_23
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22351..23193
|
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAO56285.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO56285.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
enoyl-CoA hydratase; K01692 enoyl-CoA hydratase [EC:4.2.1.17]
hypothetical protein n=1 Tax=Blastomonas sp. AAP53 RepID=UPI0002FFD5E4
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23338..23907
|
ATP synthase subunit delta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B3AC84
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ATP synthase subunit delta-like
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_25
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23913..25442
|
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha n=1 Tax=Sphingomonas sp. S17 RepID=F3X2U1_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_26
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25491..26369
|
F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
F0F1 ATP synthase subunit gamma n=1 Tax=Sphingomonas echinoides RepID=UPI00026C934E
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_27
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26394..27863
|
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
atpD; F-type H+-transporting ATPase beta chain (EC:3.6.3.15); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]
F0F1 ATP synthase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364A085
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_28
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27909..28160
|
AtpC protein {ECO:0000313|EMBL:KIU27354.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KIU27354.1};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
atpC; H+-transporting two-sector ATPase delta/epsilon subunit (EC:3.6.3.14); K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14]
F0F1 ATP synthase subunit epsilon n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B2F2E5
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28453..29625
|
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAD2_NOVAD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD25191.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_300_bf_scaffold_473_curated_30
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29865..31133
|
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAD1_NOVAD
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABD25192.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|