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SCNpilot_cont_300_bf_scaffold_582_curated_3

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(1199..2071)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=1 Tax=Sphingomonas sp. LH128 RepID=J8VSL3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 280.0
  • Bit_score: 449
  • Evalue 3.00e-123
Conjugal transfer protein TrbF {ECO:0000313|EMBL:EJU13615.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 280.0
  • Bit_score: 449
  • Evalue 4.20e-123
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 285.0
  • Bit_score: 445
  • Evalue 1.00e-122

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Taxonomy

Sphingomonas sp. LH128 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGTTTTTCAAGCGATCCATCCAGCGTTACGGGCTGACGCCCGAACCGGATACACCCTACCAGCGCGCGGGTCAGCTCTGGGATGAGCGTATCGGTTCTGCCCGCGTGCAGGCGAGGAACTGGCGGCTTGTCGCCTTCTCCTGCCTTGGCCTGACCGGCGTTCTCATCGGCTCGAACGTCTGGCAGTCGATGCAGAGCCGCGTCGCGCCCTATGTGGTCGAGGTGGACAGGCTGGGCGAGGCCCGCAGCGTCGCGCCCGCGATCCAGAACTATCAGCCCACCGACGGCCAGGTCGCCTGGCATCTGGCGCGCTTCATCAGTAATGTCCGTTCGGTCTCCACCGATCCGGTGCTGGTCAAGCGCGACTGGCTCGACGCCTATGACTTCGCGACCGACCGGGCCGCGATCTTCCTGAACGAATATGCCCGCGCCAACGACCCGTTCGCCGGGATCGGCGAGCGCAGCGTGTCGGTGCAGGTGACGAGCGTGGTGCGCGCCTCGGACAGCAGTTTTCAGGTCAAGTGGACCGAGAGCATCTACGAGCGCGGCAGCCTGGCGAAAACAGAACACTGGACCGCGATGCTGACCGTGGTGATGCAGCCGCCCAAGACCGCTGACACGCTGCGCAAGAACCCGCTCGGCCTCTATGTCAACGCCATCGACTGGGCGCGCGAACTCGACGGCCAGCCTGCGCAGTTCGGCCAAACCGGGCCAAACCACGCAGCGGCAGGCCAGTCCCGGGCAGGGCAGCAATCGCCCGATAATTCTCCGCCCGCGATTCCCGCGTTCGATCCCGCACGGGCCGCGCTGCCCACCGCGCCGGACATAGGACCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATGA
PROTEIN sequence
Length: 291
MFFKRSIQRYGLTPEPDTPYQRAGQLWDERIGSARVQARNWRLVAFSCLGLTGVLIGSNVWQSMQSRVAPYVVEVDRLGEARSVAPAIQNYQPTDGQVAWHLARFISNVRSVSTDPVLVKRDWLDAYDFATDRAAIFLNEYARANDPFAGIGERSVSVQVTSVVRASDSSFQVKWTESIYERGSLAKTEHWTAMLTVVMQPPKTADTLRKNPLGLYVNAIDWARELDGQPAQFGQTGPNHAAAGQSRAGQQSPDNSPPAIPAFDPARAALPTAPDIGPXXXXXXXXXXXE*