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SCNpilot_cont_300_bf_scaffold_626_curated_6

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(8778..9683)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IES3_BEII9 similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 300.0
  • Bit_score: 413
  • Evalue 1.50e-112
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 67.3
  • Coverage: 300.0
  • Bit_score: 413
  • Evalue 4.60e-113
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.0
  • Coverage: 294.0
  • Bit_score: 421
  • Evalue 7.50e-115

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
TTGTGGTTGGAAGACTTTCTCGCGCTCGCGAGCGAAAGCAATTTTTCGCGTGCCGCCGCGGCGCGCAATCTCAGCCAACCGGCCTTCAGCCGTCGCATCCGATCATTGGAAGACTGGGTCGGCGTCACCTTGGTCGATCGCGACACCCATAGGATCGCGCTGACCGAAGCCGGCAACGCGTTCCGGCTCGTCGCCGAGGAGGTTTCCCGGAGGCTGGCGATCGGCCGCGACGAGGCGAAGGAGATCGGCAGCGCGCGGATCAGCGAATTGCGCTTCGCGGCGACGCACGCGCTGTCGGTGACCTTCTTTCCGGCGTGGCTGCAGTCGCTCGAGGACGAAGCCGGATTCGGCACGATCACGTTGATCGCCGATCATATGGTCGCCTGCGAGCGCTATATGCTCGAGGGGCGGGCCGATTTCCTGCTTTGCCACGATCATCCTGCGGCGACCAACCGCCTCGATCCGAGCGGCTTTTCCTCGATCCATATCGGGCAGGATTTGCTGCTGCCGGTCACCGGCGCCGACGCCGATGGCAAGCCGCTCAATCAACTGCCGGGCAGTCACGAAGCACCGCTGCCCTATCTGGAATTCGAAAGCCGGTCGGGGATGGGGCGGATCCTCCAGGCGTCGCAGACGCTGATCTCGGGCGGTGCGATCCTCAAGCCGGTGTTCCGGTCGCATCTCGCCAATGGGTTGCTGACGATGGCGCGCGACGGCCGCGGGGTTACCTGGGCCCCGCTCAGCCTTGCCGGCCCCGATCTGGAGAGCGGCCGGCTCGCCCGCGCCGGGGGCGAACAATGGGACGTCCCGATCGAGATCCGGCTCTATCGCCCGCGCGCGCGGCGATCGCCCTCGGTCGAGCGTTTCTGGAACATGATCCGCGCGGGATCGAAGCGAGCGGACTAG
PROTEIN sequence
Length: 302
LWLEDFLALASESNFSRAAAARNLSQPAFSRRIRSLEDWVGVTLVDRDTHRIALTEAGNAFRLVAEEVSRRLAIGRDEAKEIGSARISELRFAATHALSVTFFPAWLQSLEDEAGFGTITLIADHMVACERYMLEGRADFLLCHDHPAATNRLDPSGFSSIHIGQDLLLPVTGADADGKPLNQLPGSHEAPLPYLEFESRSGMGRILQASQTLISGGAILKPVFRSHLANGLLTMARDGRGVTWAPLSLAGPDLESGRLARAGGEQWDVPIEIRLYRPRARRSPSVERFWNMIRAGSKRAD*