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SCNpilot_cont_300_bf_scaffold_904_curated_10

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(9807..10487)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D60B1D related cluster n=1 Tax=unknown RepID=UPI0003D60B1D similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 225.0
  • Bit_score: 362
  • Evalue 2.90e-97
XRE family transcriptional regulator {ECO:0000313|EMBL:ETI65305.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 225.0
  • Bit_score: 362
  • Evalue 4.00e-97
response regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 226.0
  • Bit_score: 294
  • Evalue 3.00e-77

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Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCGGATATTGATCGTCGAGGATGATGCCGAGACCCGCGCATTCGTCGCGCAGGGGTTGAGCGAGGCCGGCCATCAGGTCTCGGTCAGCGACGACGGTCGCGATGGCCTGTTTCAGGCGACCGGCGGCGAGTTCGATGCCATTGTGCTCGATCGCATGCTGCCGGGCCTCGACGGCCTTGCATTCGTCAAGGCGCTGCGCGCGGCGGGCGGCGCAACCCCGGTCCTGATGTTGACCGCGATCGGCGGTATCGCCGATCGCGTCGAAGGGCTCGAAAGCGGAGCCGATGATTATCTCGTGAAGCCATTTGCGTTTTCGGAACTGGCCGCGCGGCTCAATGCGCTCGCGCGCCGTCCGACGGCGCTCGACAGCGAGGGCGCGCATCTGCTCAAAATTGGCGATATCGTGCTCGACTGGCACCGGCGCACCGTCGAGCGTCGTGGACGGCGCGTCATCCTGCAACCGCGCGAATTTGCACTGCTTGCCGAACTGATGCGCAACCCGCGGCGCGTGATGACGCGCACCATGCTGCTCGAGCGGGTATGGGATTTCGATTTCGACCCCAGGACCAACATCGTCGAGACGCACCTGAGCCGGTTGCGCTCCAAGCTCAACGCCGGTTTCGACGAGGATGCGATCGAGACGGTGCGCGGGGCCGGCTATATGATCCGGGGCGAGTAG
PROTEIN sequence
Length: 227
MRILIVEDDAETRAFVAQGLSEAGHQVSVSDDGRDGLFQATGGEFDAIVLDRMLPGLDGLAFVKALRAAGGATPVLMLTAIGGIADRVEGLESGADDYLVKPFAFSELAARLNALARRPTALDSEGAHLLKIGDIVLDWHRRTVERRGRRVILQPREFALLAELMRNPRRVMTRTMLLERVWDFDFDPRTNIVETHLSRLRSKLNAGFDEDAIETVRGAGYMIRGE*