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SCNpilot_cont_300_bf_scaffold_904_curated_11

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(10496..11872)

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VPR3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 72.0
  • Coverage: 457.0
  • Bit_score: 633
  • Evalue 1.80e-178
Sphingomonas taxi strain 30a NODE_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26031.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 459.0
  • Bit_score: 657
  • Evalue 1.20e-185
Outer membrane efflux protein similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 460.0
  • Bit_score: 406
  • Evalue 8.50e-111
  • rbh

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Taxonomy

Sphingomonas taxi → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1377
ATGATCCGCTGCTTTGCTCCTTTGCTGGCGCTGCTTGCCGCTGCCTGCATGAGCGTCTCCAAGCCGCCGGCGCTCACCGCTGCGCCCCGCGCGACCGGCGCGTTCGCGCCATTTCCCGTCACCTCGATTGCGCCAGTTCCCGATGACTGGTGGCGGCTCTACGACGATCCCGCGCTCGACGCGCTGGTCCGTGCCTCGCTCGCTGCCAATGCGGATCTTCGGGCTGCTTACGCCAACCTCGATGGCGCGCGCGCGGCGCAGCGCCAGGCTCAGGCCGCGCGGCTCCCGCAGACCACGATTGAAAGCGCGCTCGGCGTTGACGATCCCGCCTCACAGCCAAGCGCATCGGGCAATGTGCCGGCGACCGATTATGACATCGCGGCGACCGCGAGCTGGGATATCGATCTGTTTGGCCGGCTCCGCTCGGCCGCGACCGCGGCGCGCGCCGATGCCGAGGCCCTCGCCGCCGTCGCCGACGGACTGCGCGTTGCCGTGGTCGCCGATACGGTGCTGGCCTATGTCGATCTCTGCGGGACGACGCGCGCGATCGGTGTCGCGCGGGAGGTTGCCGCGGTGCAGGATCGCGGGGTCGCATTGGTGCGCGAGCAGCTCCGTGCGGGTGAAGTATCGCCGCTGGAAGTCTCACAGGTGGCGACCATCGCGGCCACGACCCGCGCGGCGATCGCGCCGTTCGAAGCGCAGCGCGCCAATGCACTGTATCGACTCGCGACACTGCAAGGTCGCCCGCCGGCCGAGGCCCGCGCCTATCGCTTCACCTGCTCCGCCGCGCCCCGGTTGCGCACCGCGGCGCCGGTCGGCGACGGGACCACGCTGCTCCTGCGCCGCCCCGACGTCCGCGAAGCCGAGCGCCGGCTCGCTGCAACAGCGGCCCGGGTCGGCGTCGCACGCGCGGACCTTTATCCGCGCGTCAACCTGGGCGGTGCGCTCGGACTCCTATCGGGAGGCTTGAAAGCGGTCGCCTCGCCGCTCGTCACCTGGGCGTTTCCCAATCAGGGGCCGGCTCGCGCGCGGCTCGAACAGGCCCGCGCGGCCGAACGCGCGGCGCTCGCGGGATGGGATAGCGCGGTCCTGCGCTCACTCCGCGAGGTCGAGACCGCATTGGCCGCCTATGATGCGGAAGTGCGCCGGAACCGCGATCTGGCGCTCGCCTCACGCGAGGCGCAGAATTATGCCCGTCGCGCCAGCGCGCGCGTCCGCCTTGGCGATGCGCCAGGGCTGCTTCAGGTCGATGCCCGGCGTGCGATGGCCGAGGCCCTGCTGCGCGAGGCCCAGTCCGATCTCGTCGTGTCGCAAAACGAGGTCGCGCTGTTTCGGGCATTGGGTGGAGGTTGGCGTACAGATGCGGGTGCGCGATAG
PROTEIN sequence
Length: 459
MIRCFAPLLALLAAACMSVSKPPALTAAPRATGAFAPFPVTSIAPVPDDWWRLYDDPALDALVRASLAANADLRAAYANLDGARAAQRQAQAARLPQTTIESALGVDDPASQPSASGNVPATDYDIAATASWDIDLFGRLRSAATAARADAEALAAVADGLRVAVVADTVLAYVDLCGTTRAIGVAREVAAVQDRGVALVREQLRAGEVSPLEVSQVATIAATTRAAIAPFEAQRANALYRLATLQGRPPAEARAYRFTCSAAPRLRTAAPVGDGTTLLLRRPDVREAERRLAATAARVGVARADLYPRVNLGGALGLLSGGLKAVASPLVTWAFPNQGPARARLEQARAAERAALAGWDSAVLRSLREVETALAAYDAEVRRNRDLALASREAQNYARRASARVRLGDAPGLLQVDARRAMAEALLREAQSDLVVSQNEVALFRALGGGWRTDAGAR*