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SCNpilot_cont_300_bf_scaffold_646_curated_1

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 3..221

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0P4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 72.0
  • Bit_score: 136
  • Evalue 8.30e-30
DNA, contig: SP622 {ECO:0000313|EMBL:GAN13578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 72.0
  • Bit_score: 136
  • Evalue 1.20e-29
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 72.0
  • Bit_score: 135
  • Evalue 7.60e-30

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 219
ACCGGCGAGAAGGCGACCGGCACGGTCAAGTTCTTCAACGCGATGAAGGGCTTCGGCTTCATTCAGCGCGACGACGGGCAGCCCGATGCGTTCGTCCACATCTCGGCCGTCGAGCGCGCCGGGATGAGCAGCCTCAACGAAGGCGATCGCCTGTCGTTCGAGCTGGAGGTCGATCGTCGCGGCAAATATGCCGCAGTGAACCTGCAGCAGTCGAGCTGA
PROTEIN sequence
Length: 73
TGEKATGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMSSLNEGDRLSFELEVDRRGKYAAVNLQQSS*