name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_646_curated_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..221
|
Cold-shock DNA-binding domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X0P4_9SPHN
DNA, contig: SP622 {ECO:0000313|EMBL:GAN13578.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_2
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
460..1248
|
glutamine cyclotransferase n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B37F8C
Glutamine cyclotransferase {ECO:0000313|EMBL:EZP51732.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
glutamine cyclotransferase
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_3
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1334..2782)
|
ammonia channel protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB22
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
ammonium transporter; K03320 ammonium transporter, Amt family
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_4
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2794..3132)
|
nitrogen regulatory protein P-II 1 n=1 Tax=Sphingomonas melonis RepID=UPI00036B0E60
Sphingomonas taxi strain 30a NODE_42, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26641.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
nitrogen regulatory protein P-II
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_5
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3355..3555)
|
hypothetical protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B5AED8
Uncharacterized protein {ECO:0000313|EMBL:AIT07236.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_6
Blastomonas sp. CACIA14H2, Blastomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3552..4112)
|
pyridoxamine 5''''-phosphate oxidase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB25
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:ESZ86030.1}; TaxID=1419876 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Blastomonas.;" source="Blastomonas sp. CACIA14H2.;"
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_7
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4138..5901)
|
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003785D91
Uncharacterized protein {ECO:0000313|EMBL:AIF46045.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_8
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6010..7434)
|
peptidase C69 n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000371118D
Modulator of DNA gyrase family protein {ECO:0000313|EMBL:EZP51037.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
C69 family peptidase; K03568 TldD protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_9
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7580..7810)
|
Zinc-finger domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1L3_9SPHN
DNA, contig: SP624 {ECO:0000313|EMBL:GAN13730.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7878..8801
|
ABC transporter family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3X1L4_9SPHN
Multidrug ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIT07240.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
ABC transporter
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_11
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8817..8993)
|
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SFK6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU11649.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_12
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8993..9445)
|
transcription antitermination protein NusB n=2 Tax=Sphingomonas melonis RepID=UPI00036843F6
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
NusB antitermination factor; K03625 N utilization substance protein B
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_13
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9469..10761)
|
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
histidinol dehydrogenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035D2956
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_14
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10758..11408)
|
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hisG; ATP phosphoribosyltransferase catalytic subunit (EC:2.4.2.17); K00765 ATP phosphoribosyltransferase [EC:2.4.2.17]
ATP phosphoribosyltransferase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0CA
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11469..12572
|
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289360E
Sphingomonas taxi strain 30a NODE_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIU27849.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_16
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12701..12904
|
50S ribosomal protein L35 n=1 Tax=Sphingomonas sp. S17 RepID=F3X268_9SPHN
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_17
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12918..13283
|
50S ribosomal protein L20 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B61174
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_18
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13504..14586
|
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Sphingomonas melonis RepID=UPI0003826C37
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_19
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14583..16079
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
pheT; phenylalanyl-tRNA synthetase subunit beta; K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BEED6
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_20
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16076..16939
|
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
pheT; phenylalanyl-tRNA ligase subunit beta (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit beta n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037BEED6
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_21
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16932..17813
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000361D39E
Aldose epimerase {ECO:0000313|EMBL:AIT07853.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
aldose 1-epimerase
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17871..19397
|
Peptide chain release factor 3 n=1 Tax=Sphingomonas sp. S17 RepID=F3WYC1_9SPHN
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
peptide chain release factor 3; K02837 peptide chain release factor 3
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_23
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19494..19844)
|
Major facilitator transporter n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4F3_9SPHN
Sphingomonas taxi strain 30a NODE_24, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26104.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
major facilitator transporter
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_24
unknown
|
Not on your lists |
20110..20298
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_646_curated_25
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20816..23158)
|
TonB-denpendent receptor n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4C90D
TonB-dependent receptor {ECO:0000313|EMBL:AJR23978.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23267..23911
|
TetR family transcriptional regulator n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDB21
TetR family transcriptional regulator {ECO:0000313|EMBL:AJP73477.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
TetR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_27
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24030..24314)
|
Uncharacterized protein n=1 Tax=Sphingobium indicum B90A RepID=I5B975_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIM66127.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_28
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24480..24749)
|
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037DA0D3
MerR family transcriptional regulator {ECO:0000313|EMBL:KHA64117.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
MerR family transcriptional regulator
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_29
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24820..25119)
|
integration host factor subunit alpha n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B6099F
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
integration host factor subunit alpha
|
|
SCNpilot_cont_300_bf_scaffold_646_curated_30
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25221..26189)
|
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
3-oxoacyl-(acyl carrier protein) synthase III (EC:2.3.1.180)
3-oxoacyl-ACP synthase n=1 Tax=Sphingomonas RepID=UPI000287C35E
|