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SCNpilot_cont_300_bf_scaffold_554_curated_8

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(10606..11298)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4A755 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 230.0
  • Bit_score: 425
  • Evalue 2.80e-116
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 230.0
  • Bit_score: 417
  • Evalue 1.10e-113
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 232.0
  • Bit_score: 398
  • Evalue 1.50e-108

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGGCGAAGCTGACCAAGAAGCATAAGGCGATCCAGATCGATCGCGAGAAGCTGCACGGCGTCGACGAGGCGATCGCGCTGGCCAAGGCCAATGCCACCTCGAAGTTCGACGAGACGATCGAGATCGCGCTGAACCTCGGCGTCGATCCGCGTCACGCCGACCAGATGGTCCGTGGCGTCGTCACGCTCCCGGCCGGCACCGGCAAGACGGTGCGCGTCGGCGTGTTCGCCAAGGGCGCGAAGGCCGATGAGGCGCGCGCTGCCGGTGCGGACGTCGTGGGCGCCGAGGATCTGATGGAAACGATCCAGGGCGGCACGATCGATTTCGACCGCTGCATCGCGACCCCGGACATGATGGGCGTCGTCGGCCGTCTCGGTAAGGTGCTCGGCCCCAAGGGCCTGATGCCGAACCCGAAGCTCGGCACCGTGACGATGAACGTCGCCGAGGCGGTGAAGGCGGCCAAGGGCGGCCAGGTCGAATATCGCGTCGAAAAGGCCGGCATCATCCACTCCGGCATCGGCAAGGCGAGCTTCGCCGCCGAAGACCTGCGTCGCAACTTCGACGCGCTGGTCGATGCGGTGATCAAGGCCAAGCCGTCGGGCGCCAAGGGCAAGTATGTCCGCAAGATCGCGGTCAGCTCGACGATGGGCCCGGGGATCAAGGTCGACGTGGCGGAAGTCGCCGGCGCCTGA
PROTEIN sequence
Length: 231
MAKLTKKHKAIQIDREKLHGVDEAIALAKANATSKFDETIEIALNLGVDPRHADQMVRGVVTLPAGTGKTVRVGVFAKGAKADEARAAGADVVGAEDLMETIQGGTIDFDRCIATPDMMGVVGRLGKVLGPKGLMPNPKLGTVTMNVAEAVKAAKGGQVEYRVEKAGIIHSGIGKASFAAEDLRRNFDALVDAVIKAKPSGAKGKYVRKIAVSSTMGPGIKVDVAEVAGA*