ggKbase home page

SCNpilot_cont_300_bf_scaffold_2077_curated_7

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: comp(5421..6365)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S9D2_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 296.0
  • Bit_score: 377
  • Evalue 1.60e-101
Uncharacterized protein {ECO:0000313|EMBL:AHE53285.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.1
  • Coverage: 309.0
  • Bit_score: 399
  • Evalue 4.10e-108
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 296.0
  • Bit_score: 377
  • Evalue 4.90e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGTCGGCGTGGCGTGGGATCGACGAGTTTCTGGCCGTCATCGCCGCCGGCAGCTTCACCGCCGCGGCCGAGCGGCTGGGGGCGTCGAAATCCTTCGTCAGCAAGACGGTCGCCGAGCTCGAGCAGCGCGTGGGCGCGCAATTGATCGTGCGGACGACGCGGCGGCTGTCGCTCACCGCGGCAGGCGAATTCTTCCACCAGCGCTGCGTCGCGATGCAGGGCGATCTGTTCGCGCTCGAACGCAGCATGGCGCAATTCCAGTCGCATCCGATCGGGCGCTTGCGGATCGTGCTCAGCGATACCTTCGGCTCGGATTTCATGTCGGCGCTGCTCGCCGATTTCAGCGCGCGGCATCCCGATATCTCGATCCAGGTGATCGCCTATTTGAGCGAAGCCAACCTGTCGGAGGAGACGTTCGACGTCGCGATCCGCTACGGCTCGCTCGGGGATTCGTCGCTCCGCGCGCGCTTCTTCGGCTATCTGTCATATTGCCTCTGCGCTTCCCCGGATTATGTCGCGCAACATGGCTGGCCGGAAACGCCGGAGGCGCTCGCCGATCACCAATGCCTCTCCGCGCCGAGCGGGCTGTTCCAGTTCAACGACGGGGTCGCCGCGCGCGTCTCGGGCAATTGGACGAGCAACAGCGGGGTCGCGCTGCGCTGGGCGGCGCGGCGCGGATTGGGCCTTGCCCATCTGCCAATCTCGCTCGTCCGCCAGGATCTGATCGACGGCCATTTGCTCGCCGCGACTGCCGACTGGACCTTCCTCGATCAGGAGGTCCGCGCGGTCTTCCCGCCGGGCATTACCCCTACGGCGACGCGCGCATTTATCGACTATCTCACCTCGCGGCTGGCGCAGAAACGGCGGGTGCGGCCGTGGATGGTCGAAAGCCTGATTCCGGCCGATCTCTCGTCCCCCGAAGGGCTCGACGACGATATGGATTAG
PROTEIN sequence
Length: 315
MSAWRGIDEFLAVIAAGSFTAAAERLGASKSFVSKTVAELEQRVGAQLIVRTTRRLSLTAAGEFFHQRCVAMQGDLFALERSMAQFQSHPIGRLRIVLSDTFGSDFMSALLADFSARHPDISIQVIAYLSEANLSEETFDVAIRYGSLGDSSLRARFFGYLSYCLCASPDYVAQHGWPETPEALADHQCLSAPSGLFQFNDGVAARVSGNWTSNSGVALRWAARRGLGLAHLPISLVRQDLIDGHLLAATADWTFLDQEVRAVFPPGITPTATRAFIDYLTSRLAQKRRVRPWMVESLIPADLSSPEGLDDDMD*