ggKbase home page

SCNpilot_cont_300_bf_scaffold_789_curated_4

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 3847..4989

Top 3 Functional Annotations

Value Algorithm Source
thymidine phosphorylase; K00756 pyrimidine-nucleoside phosphorylase [EC:2.4.2.2] similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 357.0
  • Bit_score: 248
  • Evalue 4.20e-63
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00037A7988 similarity UNIREF
DB: UNIREF100
  • Identity: 94.7
  • Coverage: 228.0
  • Bit_score: 433
  • Evalue 2.90e-118
Putative thymidine phosphorylase-like protein {ECO:0000313|EMBL:KIN90505.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 338.0
  • Bit_score: 249
  • Evalue 8.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thauera sp. SWB20 → Thauera → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1143
ATGCATCGTTTCGAAAAAGTAGTCCGCACGGCAGTTTTCGACGGCCTTAATCTCGAACAGATTGCCGAGCTGGCCCTCCAGCTTGCCGCCTCCGGCAGTCAGCTTAATCTTGGAGATGCCACTACGGCGGATATCGCTTCGACGGGAGGCCCGACTAGCCTTTCGACCCTGTTATGCCCTCCAATGCTCGTCGCGACCGGATGGCTGGTGCCGAAACTGGGAGTGCCAGGCCGCCCAGCTGGTGGTATCGACGTGCTCGGAACAATTCCCGGCTACCGGACAGCACTTGACGCCGCGGCAGCCGGCCGACTGCTTGCGAATTGCAACTACGTCCATGTCGATGCCGGCGGTACCTTCGCACCGGCGGACGCAGCACTCTTCCGATATCGACAACAGGTCGGAGCCCAGGCTGTCCCCGATCTCGCAATCGCCAGCTTATTGTCGAAAAAAGTCGCGATGGGGGTCAAGCGGGTCGGCCTGGAGGTGAGAGTGGCGAGCCACGGCAACTTCGGCTCCGATTTCTCCGAAGCGAGGCAGGCCTCCCGAAAATTTTGCGAAGTGGCGCGCATTCTCCGCATGGAGCCAGTCTGCCTCTTGACCGACGCGAGCCGACCATTTCAGCCGTTCGTCGGTCGTGGGGAAGCGTTGCTTGCCCTCAAGCTTGTTCTGGATGGCGACGAAAATGCTTGGCTTGCCGAGCATGTCGAGGCCTGCGCCTCGATGGTGTCAGCGGTCGGCGGCCCGGCAGAATTCGATCGCAGGGGAATGTCTAAGGCCGCCATTCGCAACATTGAAGCGCAGGGCGGGACCGAACACGCATTTCGGAAATATGCCGACGAGATTGCAGTTTGTCATAATCGCCCACTCGTTGCTGACACGACGGGACATGTTCGCTACGATCTCGACAAAATCCGCACCGCGGTCATGCAAGCGCAGGGTACGTCGCCCGGCTATCCTGACGATGCCGGCCTGTTTCTTCGGGCCCGGCCCGGCGATCGTGTCGAGCCCGGGGAAGAGCTACTGTCTATTCGTTGCCCGGAGGCTACGAGGCGGACTTTTGAGGCCGCGCTGCGGAGTGCGATTACGATCGACGCGACGCCGACTGGCTCGCCGCCTGTGGCGATGGAGTGTGTGAATGTCTGA
PROTEIN sequence
Length: 381
MHRFEKVVRTAVFDGLNLEQIAELALQLAASGSQLNLGDATTADIASTGGPTSLSTLLCPPMLVATGWLVPKLGVPGRPAGGIDVLGTIPGYRTALDAAAAGRLLANCNYVHVDAGGTFAPADAALFRYRQQVGAQAVPDLAIASLLSKKVAMGVKRVGLEVRVASHGNFGSDFSEARQASRKFCEVARILRMEPVCLLTDASRPFQPFVGRGEALLALKLVLDGDENAWLAEHVEACASMVSAVGGPAEFDRRGMSKAAIRNIEAQGGTEHAFRKYADEIAVCHNRPLVADTTGHVRYDLDKIRTAVMQAQGTSPGYPDDAGLFLRARPGDRVEPGEELLSIRCPEATRRTFEAALRSAITIDATPTGSPPVAMECVNV*