ggKbase home page

SCNpilot_cont_300_bf_scaffold_789_curated_27

Organism: scnpilot_dereplicated_Sphingomonas_3

near complete RP 46 / 55 MC: 5 BSCG 45 / 51 MC: 4 ASCG 11 / 38
Location: 33934..34167

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Variovorax sp. WDL1 RepID=M1KKV9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 77.0
  • Bit_score: 123
  • Evalue 1.30e-25
XRE family transcriptional regulator {ECO:0000313|EMBL:AGF25456.1}; TaxID=207745 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. WDL1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 77.0
  • Bit_score: 123
  • Evalue 1.90e-25
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 69.0
  • Bit_score: 75
  • Evalue 7.60e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. WDL1 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 234
GTGTCGAGCAGGAAGATCCTTGCCCATAATCTGCGCGTGCTTCGCGCAGCGAGGGGTTTGTCGCAGGAGGCGCTCGCCGATGCCGCGAAGATCGACCGAACCTACGTGAGCGCTCTTGAACGTCAGAAATATAGCGTGACGATTGATCGGCTCGATCAGATCGCCGAGCCTCTGGGCGTAGACCCCTATATCCTGCTGATGCCGGAGCTGCCGGCAAACTCCCTAAAGGGATGA
PROTEIN sequence
Length: 78
VSSRKILAHNLRVLRAARGLSQEALADAAKIDRTYVSALERQKYSVTIDRLDQIAEPLGVDPYILLMPELPANSLKG*