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SCNpilot_cont_300_bf_scaffold_657_curated

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_657_curated_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62..208)
DNA (147bp) protein (49aa)
conjugal transfer protein TraL n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037A9579
Type IV conjugative transfer system protein TraL {ECO:0000313|EMBL:KEZ13736.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Type IV conjugative transfer system protein TraL; K12068 conjugal transfer pilus assembly protein TraL
SCNpilot_cont_300_bf_scaffold_657_curated_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267..587)
DNA (321bp) protein (107aa)
membrane protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003798107
Membrane protein {ECO:0000313|EMBL:KEZ13735.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_3
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

994..1398
DNA (405bp) protein (135aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000375DCC7
Uncharacterized protein {ECO:0000313|EMBL:KEZ13734.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1540..2067
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035EF65D
Uncharacterized protein {ECO:0000313|EMBL:KEZ13733.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2580..3851
DNA (1272bp) protein (424aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035DE62C
Uncharacterized protein {ECO:0000313|EMBL:KEZ13732.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
replication protein C
SCNpilot_cont_300_bf_scaffold_657_curated_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4234..5130
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037485F0
Replication initiator A family protein {ECO:0000313|EMBL:KEZ13731.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5131..6066)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366999E
Transglycosylase SLT domain protein {ECO:0000313|EMBL:KEZ13730.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
lytic transglycosylase, catalytic
SCNpilot_cont_300_bf_scaffold_657_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6305..7447
DNA (1143bp) protein (381aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000370B769
Uncharacterized protein {ECO:0000313|EMBL:KEZ13729.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7966..8652
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366E0FB
ParA {ECO:0000313|EMBL:KEZ13728.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
parA; ParA protein, putative plasmid partitioning protein; K03496 chromosome partitioning protein
SCNpilot_cont_300_bf_scaffold_657_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8649..9158
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CB96F
Uncharacterized protein {ECO:0000313|EMBL:KEZ13727.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_657_curated_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9200..10066
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036BBDE3
Uncharacterized protein {ECO:0000313|EMBL:KEZ13726.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10135..10908
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003638F67
Uncharacterized protein {ECO:0000313|EMBL:KEZ13725.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10908..11582
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037308C0
Uncharacterized protein {ECO:0000313|EMBL:KEZ13724.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11741..14305
DNA (2565bp) protein (855aa)
methylase, partial n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000375AF43
Putative methylase/helicase {ECO:0000313|EMBL:KEZ13723.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative methylase/helicase
SCNpilot_cont_300_bf_scaffold_657_curated_15
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14338..15882
DNA (1545bp) protein (515aa)
Phage integrase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGK8_9SPHN
phage integrase
Phage integrase {ECO:0000313|EMBL:CCA91274.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_657_curated_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15879..16793
DNA (915bp) protein (305aa)
Phage integrase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IGK9_9SPHN
phage integrase
Phage integrase {ECO:0000313|EMBL:CCA91275.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_657_curated_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16790..17794
DNA (1005bp) protein (335aa)
integrase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036DD69F
phage integrase
Phage integrase {ECO:0000313|EMBL:CCA91276.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
SCNpilot_cont_300_bf_scaffold_657_curated_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18519..20366
DNA (1848bp) protein (616aa)
hypothetical protein, partial n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036D2EBB
Putative methylase/helicase {ECO:0000313|EMBL:KEZ14638.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative methylase/helicase
SCNpilot_cont_300_bf_scaffold_657_curated_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20518..20946
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F4EEB
Uncharacterized protein {ECO:0000313|EMBL:KEZ14639.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_657_curated_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20954..21589)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003737133
Uncharacterized protein {ECO:0000313|EMBL:KEZ14640.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21591..22718)
DNA (1128bp) protein (376aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371FD8D
Uncharacterized protein {ECO:0000313|EMBL:KEZ14641.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22754..24037)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00038263E2
Abortive phage resistance protein {ECO:0000313|EMBL:KEZ14642.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24195..24977)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003694EEB
Uncharacterized protein {ECO:0000313|EMBL:KEZ14643.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25227..25439)
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366ECB4
Uncharacterized protein {ECO:0000313|EMBL:KEZ14644.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_657_curated_25
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25792..27900
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003804395
Chromosome partitioning protein ParB {ECO:0000313|EMBL:KEZ14645.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
ParB family protein; K03497 chromosome partitioning protein, ParB family
SCNpilot_cont_300_bf_scaffold_657_curated_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27985..28935
DNA (951bp) protein (317aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037ED759
Uncharacterized protein {ECO:0000313|EMBL:KEZ14646.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28935..29738
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037AA880
Uncharacterized protein {ECO:0000313|EMBL:KEZ14647.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30243..30731)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003662C2B
Uncharacterized protein {ECO:0000313|EMBL:KEZ14649.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_657_curated_29
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30780..31220)
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003622035
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KEZ14650.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_657_curated_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31409..32050
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037F6A0D
Uncharacterized protein {ECO:0000313|EMBL:KEZ14651.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
Displaying 30 items

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