name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_175_curated_1
unknown
|
Not on your lists |
189..536
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_175_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(614..1300)
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C3A6
phage transcriptional regulator, AlpA; K07733 prophage regulatory protein
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ABJ07194.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2108..3589)
|
tryptophan halogenase n=1 Tax=Caulobacter RepID=UPI0003668810
tryptophan halogenase
Tryptophan halogenase {ECO:0000313|EMBL:ABZ70982.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_4 |
Not on your lists |
comp(3600..4637)
|
Cupin-like domain n=1 Tax=uncultured organism RepID=T1WA36_9ZZZZ
Cupin-like domain {ECO:0000313|EMBL:AGU10980.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
transcription factor jumonji jmjc domain-containing protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_5 |
Not on your lists |
comp(4634..5341)
|
SapC n=1 Tax=uncultured organism RepID=T1W903_9ZZZZ
SapC {ECO:0000313|EMBL:AGU10979.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
SapC family protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_6 |
Not on your lists |
comp(5490..8636)
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F94236
TonB-dependent Receptor Plug Domain {ECO:0000313|EMBL:AGU10961.1}; Flags: Fragment;; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
TonB-dependent receptor
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_7
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8975..9418)
|
methionine sulfoxide reductase B (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SJZ9_9SPHN
|
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SCNpilot_cont_300_bf_scaffold_175_curated_8
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9455..9709
|
hypothetical protein n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D413E0
Sphingomonas taxi strain 30a NODE_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIU30097.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_9
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9673..10716)
|
putative L-carnitine dehydratase (EC:2.8.3.-)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI0002D3CF7A
CoA-transferase family III family protein {ECO:0000313|EMBL:EGF95542.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;"
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10767..11549)
|
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAO55142.1}; EC=1.1.1.100 {ECO:0000313|EMBL:GAO55142.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9F8_NOVAD
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11567..12742)
|
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KFD29784.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KFD29784.1};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
PREDICTED: 3-ketoacyl-CoA thiolase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C193ED
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_12
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13047..13418
|
two component response regulator PhoB n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000289E162
response regulator receiver
BaeS protein {ECO:0000313|EMBL:BAQ45515.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
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SCNpilot_cont_300_bf_scaffold_175_curated_13
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13547..14044)
|
twitching motility protein PilT n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4A0
pilt protein domain protein; K07062
PilT protein domain protein {ECO:0000313|EMBL:ADU14963.1}; TaxID=573065 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
|
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SCNpilot_cont_300_bf_scaffold_175_curated_14
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14044..14268)
|
prevent-host-death protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC49F
Uncharacterized protein {ECO:0000313|EMBL:EQB34208.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
prevent-host-death family protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_15
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14473..15840
|
potassium transporter n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E43F63
Potassium transporter {ECO:0000313|EMBL:EQB34209.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
sodium/hydrogen exchanger
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_16
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15899..17107
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003817C37
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_17
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17153..18676)
|
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZK0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB34210.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
tryptophan halogenase
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_18
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18763..20373)
|
Beta-xylosidase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MWK9_9SPHN
Xylan 1,4-beta-xylosidase {ECO:0000313|EMBL:AJP74479.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glycoside hydrolase family protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20559..22193
|
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00035DC0E8
Uncharacterized protein {ECO:0000313|EMBL:AJP73049.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
cytochrome P450-like protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_20
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22175..23761
|
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000366D3D4
Uncharacterized protein {ECO:0000313|EMBL:AJP73048.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peroxidase
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_21
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23758..24993
|
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036F5E06
Cytochrome P450-like protein {ECO:0000313|EMBL:EAU47148.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601).;"
putative Cytochrome P450
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24997..26028)
|
Aldo/keto reductase family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVH9_9SPHN
DNA, contig: SP613 {ECO:0000313|EMBL:GAN12827.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
aldo/keto reductase
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_23
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26343..29486
|
TonB-dependent receptor n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2A3_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:AGH50145.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
TonB-dependent receptor
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_24
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29616..30503
|
ROK family protein; K00847 fructokinase [EC:2.7.1.4]
fructokinase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002D47A30
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_25
unknown
|
Not on your lists |
comp(30521..30889)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_175_curated_26
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30917..31540)
|
DNA-3-methyladenine glycosylase II n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDF4
DNA glycosylase {ECO:0000313|EMBL:AJP73042.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
HhH-GPD family protein
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_27
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31604..31921
|
ferredoxin n=1 Tax=Sphingomonas elodea RepID=UPI00026306D1
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11977.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
ferredoxin; K04755 ferredoxin, 2Fe-2S
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_28
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31958..32704)
|
RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
RNA 2'-O ribose methyltransferase substrate binding family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZB5_9SPHN
DNA, contig: SP601 {ECO:0000313|EMBL:GAN11976.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_29
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32704..34329)
|
peptidase M28 n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002DC1044
Peptidase M28 {ECO:0000313|EMBL:AJP73039.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
peptidase M28
|
|
SCNpilot_cont_300_bf_scaffold_175_curated_30
Sphingobium indicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34685..35824
|
Transposase n=1 Tax=Sphingobium indicum B90A RepID=I5B980_9SPHN
Transposase {ECO:0000313|EMBL:EIM66132.1}; TaxID=861109 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium indicum B90A.;"
transposase
|