ggKbase home page

SCNpilot_cont_300_bf_scaffold_298_curated

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_298_curated_1
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85..2964)
DNA (2880bp) protein (960aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036BBE0F
Uncharacterized protein {ECO:0000313|EMBL:KEZ16606.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
RelA/SpoT domain-containing protein
SCNpilot_cont_300_bf_scaffold_298_curated_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3609..4331
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000367365F
Damage-inducible mutagenesis protein {ECO:0000313|EMBL:KEZ16608.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein; K14160 protein ImuA
SCNpilot_cont_300_bf_scaffold_298_curated_3
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4537..5040)
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361DF18
Uncharacterized protein {ECO:0000313|EMBL:KEZ16609.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5047..5469)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037CA481
Uncharacterized protein {ECO:0000313|EMBL:KEZ16610.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6051..9269
DNA (3219bp) protein (1073aa)
Error-prone DNA polymerase {ECO:0000256|HAMAP-Rule:MF_01902}; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01902};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
dnaE2; error-prone DNA polymerase; K14162 error-prone DNA polymerase [EC:2.7.7.7]
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035E0633
SCNpilot_cont_300_bf_scaffold_298_curated_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9283..10317
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035F38E6
Uncharacterized protein {ECO:0000313|EMBL:KEZ16612.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10497..11270
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003725E7C
Uncharacterized protein {ECO:0000313|EMBL:KEZ16613.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11419..11736
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000379B67A
Uncharacterized protein {ECO:0000313|EMBL:KEZ16614.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12168..12398
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037EDFF9
Uncharacterized protein {ECO:0000313|EMBL:KEZ16615.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12466..12654
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037C95DE
Uncharacterized protein {ECO:0000313|EMBL:KEZ16616.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12658..13518
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037E6FCF
Uncharacterized protein {ECO:0000313|EMBL:KEZ16617.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13515..13988
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037B6105
Uncharacterized protein {ECO:0000313|EMBL:KEZ16618.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13988..14503
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000371CAF7
Uncharacterized protein {ECO:0000313|EMBL:KEZ16619.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14879..16069
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000373E257
Multidrug RND transporter, membrane fusion protein MexP {ECO:0000313|EMBL:KEZ16620.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
acrA; secretion protein HlyD
SCNpilot_cont_300_bf_scaffold_298_curated_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16069..19245
DNA (3177bp) protein (1059aa)
transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003643736
Hydrophobe/amphiphile efflux-1 (HAE1) family protein {ECO:0000313|EMBL:KEZ16621.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
bepE; hydrophobe/amphiphile efflux-1 (HAE1) family protein
SCNpilot_cont_300_bf_scaffold_298_curated_16
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19242..20699
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000365AFB7
Putative outer membrane drug efflux lipoprotein {ECO:0000313|EMBL:KEZ16622.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
NodT family RND efflux system, outer membrane lipoprotein
SCNpilot_cont_300_bf_scaffold_298_curated_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21719..22474
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003797E9E
AraC family transcriptional regulator {ECO:0000313|EMBL:KEZ16625.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
AraC family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_298_curated_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22562..22798
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003818708
Uncharacterized protein {ECO:0000313|EMBL:KEZ16626.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22864..23625)
DNA (762bp) protein (254aa)
membrane protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361E8B4
Glutaredoxin {ECO:0000313|EMBL:KEZ16627.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23880..24584)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036DCD56
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KEZ16628.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
transcriptional regulator, LysR family
SCNpilot_cont_300_bf_scaffold_298_curated_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24632..25870)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036E2635
OsmC family protein {ECO:0000313|EMBL:KEZ16629.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
OsmC family protein; K06889; K07397 putative redox protein
SCNpilot_cont_300_bf_scaffold_298_curated_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25940..26299)
DNA (360bp) protein (120aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035FD481
carboxymuconolactone decarboxylase
SCNpilot_cont_300_bf_scaffold_298_curated_23
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26796..27266
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366122C
Putative ester cyclase {ECO:0000313|EMBL:KEZ16631.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_298_curated_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27300..29498
DNA (2199bp) protein (733aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003741092
TonB-dependent receptor {ECO:0000313|EMBL:KEZ16632.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
TonB-dependent siderophore receptor
SCNpilot_cont_300_bf_scaffold_298_curated_25
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29628..30689
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037E5252
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:KEZ16633.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
cation diffusion facilitator family transporter; K03295 cation efflux system protein, CDF family
SCNpilot_cont_300_bf_scaffold_298_curated_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30851..31144)
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000364E92D
Uncharacterized protein {ECO:0000313|EMBL:KEZ16634.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31389..32228)
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000372F3EE
Uncharacterized protein {ECO:0000313|EMBL:KEZ16635.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_298_curated_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32470..32940)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000380A6AD
Cu(I)-responsive transcriptional regulator {ECO:0000313|EMBL:KEZ16636.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
Cu(I)-responsive transcriptional regulator
SCNpilot_cont_300_bf_scaffold_298_curated_29
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32986..33681)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003610D8D
Transcriptional regulator {ECO:0000313|EMBL:KEZ16637.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
GntR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_298_curated_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33991..36066
DNA (2076bp) protein (692aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000363D27F
Fusaric acid resistance protein FusB/FusC {ECO:0000313|EMBL:KEZ16638.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
fusaric acid resistance protein
Displaying items 1-30 of 70 in total

View Taxonomy