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SCNpilot_cont_300_bf_scaffold_571_curated

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_571_curated_1
unknown

Not on your lists

3..623
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_571_curated_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(783..2417)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000364BF41
Uncharacterized protein {ECO:0000313|EMBL:KEZ14281.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_571_curated_3
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2575..3321
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F2113
Uncharacterized protein {ECO:0000313|EMBL:KEZ14282.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_4
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3703..3942)
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037721A3
Transcriptional regulator {ECO:0000313|EMBL:KEZ14283.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_5
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4064..7108)
DNA (3045bp) protein (1015aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035DBCD8
Conjugative relaxase region-like protein {ECO:0000313|EMBL:KEZ14284.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
conjugative relaxase region-like protein
SCNpilot_cont_300_bf_scaffold_571_curated_6
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7112..9394)
DNA (2283bp) protein (761aa)
type IV secretory protein VirD4 n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036D03E9
Uncharacterized protein {ECO:0000313|EMBL:KEZ14285.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_7
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9384..9674)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037C7301
Uncharacterized protein {ECO:0000313|EMBL:KEZ14286.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_8
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10156..10374
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MIB9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEZ14287.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_9
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10524..10745)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035D21E7
Uncharacterized protein {ECO:0000313|EMBL:KEZ14288.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_10
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11135..11710)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000363E9D5
Uncharacterized protein {ECO:0000313|EMBL:KEZ14289.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_11
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11871..12845)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037670DA
Uncharacterized protein {ECO:0000313|EMBL:KEZ14290.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_12
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13276..14064)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000360C123
Uncharacterized protein {ECO:0000313|EMBL:KEZ14291.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_571_curated_13
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14328..14666)
DNA (339bp) protein (113aa)
single-stranded DNA-binding protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035C7BE2
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
single-strand binding protein/primosomal replication protein n
SCNpilot_cont_300_bf_scaffold_571_curated_14
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15090..15728)
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000369ED76
Uncharacterized protein {ECO:0000313|EMBL:KEZ14293.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_15
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15821..16837)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003690E03
Integral membrane protein TerC {ECO:0000313|EMBL:KEZ14294.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
integral membrane protein TerC; K05794 tellurite resistance protein TerC
SCNpilot_cont_300_bf_scaffold_571_curated_16
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16983..17168)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000369EC5B
Uncharacterized protein {ECO:0000313|EMBL:KEZ14295.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_571_curated_17
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17473..18432
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00035D896B
HNH endonuclease {ECO:0000313|EMBL:KEZ14296.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_18
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18432..19073
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000368F198
Uncharacterized protein {ECO:0000313|EMBL:KEZ14297.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_19
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19142..19702)
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036DDFB5
Uncharacterized protein {ECO:0000313|EMBL:KEZ14298.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_20
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20781..21104)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366E1DC
Uncharacterized protein {ECO:0000313|EMBL:KEZ14300.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_300_bf_scaffold_571_curated_21
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21124..21723)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037078DF
Uncharacterized protein {ECO:0000313|EMBL:KEZ14301.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_22
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21720..22433)
DNA (714bp) protein (238aa)
membrane protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000378DF32
Uncharacterized protein {ECO:0000313|EMBL:KEZ14302.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative transmembrane protein
SCNpilot_cont_300_bf_scaffold_571_curated_23
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22975..26208)
DNA (3234bp) protein (1078aa)
cation transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003639D52
Cation transporter {ECO:0000313|EMBL:EQB16530.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
heavy metal efflux pump CzcA; K07239 heavy-metal exporter, HME family
SCNpilot_cont_300_bf_scaffold_571_curated_24
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26205..27356)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000365ED16
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KEZ12188.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
metal ion efflux membrane fusion protein family
SCNpilot_cont_300_bf_scaffold_571_curated_25
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27353..28618)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00037DD800
Metal ion efflux outer membrane factor protein family protein {ECO:0000313|EMBL:KEZ12187.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
metal ion efflux outer membrane factor protein family protein; K15725 cobalt-zinc-cadmium resistance protein CzcC
SCNpilot_cont_300_bf_scaffold_571_curated_26
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29112..30446)
DNA (1335bp) protein (445aa)
major facilitator transporter n=1 Tax=alpha proteobacterium LLX12A RepID=UPI0003753583
H+ Antiporter protein {ECO:0000313|EMBL:KEZ12186.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
putative nickel resistance protein
SCNpilot_cont_300_bf_scaffold_571_curated_27
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30551..30820
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI00036F5F88
NreA {ECO:0000313|EMBL:KEZ12185.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_28
unknown

Not on your lists

30869..30979
DNA (111bp) protein (37aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_571_curated_29
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31070..31393)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000362F101
Uncharacterized protein {ECO:0000313|EMBL:KEZ12184.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_571_curated_30
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31494..32195)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000367E590
Uncharacterized protein {ECO:0000313|EMBL:KEZ14675.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
hypothetical protein
Displaying items 1-30 of 33 in total

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